Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2555 ATGGGTGATTGGCAATCACTTGTCCAATCCATTTTTCTTGGTCTCATTTTCTCTTACCTCCTTGCCAAGCTCATATCCATCCTTGTATCATTCAAGGACGATAATCTGACTATAACTCGCCGCAGTATTAGTAGCACCGACGATGTTAGTAATCGGAGCAAGGTAGAACCCGATGTCAACCCGTTTGTGAGCAGGCCTGATGCCGATGAAGGCGAGCATCGCGAGAATGAATCGATCTTGGCAGAGCAGGGCAGCGTGAGGAATGAAAGTGTGGACGGTGACGACGACGGTGACGACGATTGGGAGGGAGTGGAAAGTACAGAATTGGACGAGGCCTTCAGTGCTGCAACGGCTTTTGTGGCTGCTGCTGCTGCCGATCGGCTCTCACAGAAGGTGTCCAGTGATGTGCAGCTCCAGCTATATGGGCTGTACAAAATTGCAACCGAAGGGCCTTGTAGCACGCCACAGCCTTCGGCACTGAAAATGACTGGCCGAGCCAAATGGCAAGCATGGCAGAAATTGGGTGCCATGCCTCCAGAAGATGCAATGCAGAAGTATATTGATATTGTGACAGAGCTTTACCCAACCTGGTTAGATGGCTCAGCTTTGAGGAGCAAAAGCGGAGATGATGTTGGCCCAAATTCAGGGTCATCAGAATCTAAGGGACCAATGGGGCCTGTATTTAGCACTTTTGTGTATGAAGAGGAAGCTGGCAGCGATTTAAAAATGGATGCAATTCACGGGTATGCCAGAGAAGGAGACTCCACTAATCTGCTCAAGTGTATTGAAAATGGTGTTTCAGTGAATCTGAAGGACAGCGAGGGTCAGACACCATTACATTGGGCTGTGGATCGCGGTCACCTTGAGGTCACAGAACTGCTAGTTAGTAAGAATGCTGATGTTAATGCCAAGGATGATGATGGGCAAACTCCATTGCATTATGCTGTTGTGTGCGAGAGAGAGGCCATAGCTGAGTATTTAGTGAAGCATAATGCGGACCCAGATTTGAAGGATAGTGATGGCAGTTCGTCACGTGACCTCTGCAAGCCAAACTGGCGTTGCATGCAACCTGTGGGGAATTAA 1083 0.4885 MGDWQSLVQSIFLGLIFSYLLAKLISILVSFKDDNLTITRRSISSTDDVSNRSKVEPDVNPFVSRPDADEGEHRENESILAEQGSVRNESVDGDDDGDDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDVQLQLYGLYKIATEGPCSTPQPSALKMTGRAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSALRSKSGDDVGPNSGSSESKGPMGPVFSTFVYEEEAGSDLKMDAIHGYAREGDSTNLLKCIENGVSVNLKDSEGQTPLHWAVDRGHLEVTELLVSKNADVNAKDDDGQTPLHYAVVCEREAIAEYLVKHNADPDLKDSDGSSSRDLCKPNWRCMQPVGN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2555 360 Pfam Ankyrin repeats (3 copies) 247 338 IPR002110 GO:0005515
Acco10g2555 360 Gene3D - 233 352 IPR036770 -
Acco10g2555 360 MobiDBLite consensus disorder prediction 47 103 - -
Acco10g2555 360 ProSiteProfiles Ankyrin repeat profile. 274 306 IPR002110 GO:0005515
Acco10g2555 360 SUPERFAMILY Ankyrin repeat 243 348 IPR036770 -
Acco10g2555 360 MobiDBLite consensus disorder prediction 63 80 - -
Acco10g2555 360 PRINTS Acyl-coA-binding protein signature 155 170 IPR000582 GO:0000062
Acco10g2555 360 PRINTS Acyl-coA-binding protein signature 132 150 IPR000582 GO:0000062
Acco10g2555 360 PRINTS Acyl-coA-binding protein signature 176 193 IPR000582 GO:0000062
Acco10g2555 360 ProSiteProfiles Ankyrin repeat region circular profile. 307 338 - -
Acco10g2555 360 ProSiteProfiles Ankyrin repeat profile. 307 339 IPR002110 GO:0005515
Acco10g2555 360 Gene3D - 103 215 IPR014352 -
Acco10g2555 360 MobiDBLite consensus disorder prediction 208 224 - -
Acco10g2555 360 PRINTS Ankyrin repeat signature 323 337 IPR002110 GO:0005515
Acco10g2555 360 PRINTS Ankyrin repeat signature 275 290 IPR002110 GO:0005515
Acco10g2555 360 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 3 352 - -
Acco10g2555 360 ProSiteProfiles Ankyrin repeat region circular profile. 274 306 - -
Acco10g2555 360 SMART ANK_2a 241 270 IPR002110 GO:0005515
Acco10g2555 360 SMART ANK_2a 307 336 IPR002110 GO:0005515
Acco10g2555 360 SMART ANK_2a 274 303 IPR002110 GO:0005515
Acco10g2555 360 SUPERFAMILY Acyl-CoA binding protein 108 198 IPR035984 GO:0000062
Acco10g2555 360 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 109 199 IPR000582 GO:0000062
Acco10g2555 360 MobiDBLite consensus disorder prediction 205 225 - -
Acco10g2555 360 Pfam Acyl CoA binding protein 110 190 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2555 Acco-ChrAcco10 36603561 36607286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2555 1 356 Acyl Lipid Metabolism Gene Families AT5G53470 63.305 4.82e-147 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2555 10 36603561 36607286 Acco10g2555 10 36603561 36607286 ECH