Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2534 ATGGGCTGCTCTTGTTCTAAGAAAGCTAAGTCAGCAGGTTATGAGGATCCCTCTGTTCTTGCTTCTGAGACACCCTTCTCTGTGAGTGAAGTGGAGGCGCTACGTGAGCTCTATAAGAAGTTGAGCAACTCCATTATTGAAGATGGTCTAATTCACAAGGAAGAATTCCAGCTGGCACTCTTCAGCAATAAAAACAAGAGGAATCTGTTTGCAGACAGGGTTTTTGACTTATTTGATGTCAAGCGTAATGGAGTTATTGAATTTGGGGAATTTGTTCGATCATTGGCTGTTTTTCACCCAAATGCGCCTATAGAAGACAAGGTTACTTTTGCTTTTAGGTTGTATGATCTGAATCAGACGGGATATATTGAACGAGAGGAGCTAAAAGAGATGTTATTGGCGCTTCTTCATGAATCAGATCTTGTACTTTCAGATGATATTGTCGAAACCATAGTGGATAAGACATTTAGTGACGCTGATATAAAAGTTGATGGAAGGATTGATCAAGAGGAGTGGAAGGCATTTGTGTCAAAATATCCAAATTTGATGAACAACATGACCCTTCCCTACTTAATGGATATAACCTTAGCATTTCCAAGTTTTGTGGTGAGAACAGAAGTTGAAGACTCGGATGTCTGA 639 0.3991 MGCSCSKKAKSAGYEDPSVLASETPFSVSEVEALRELYKKLSNSIIEDGLIHKEEFQLALFSNKNKRNLFADRVFDLFDVKRNGVIEFGEFVRSLAVFHPNAPIEDKVTFAFRLYDLNQTGYIEREELKEMLLALLHESDLVLSDDIVETIVDKTFSDADIKVDGRIDQEEWKAFVSKYPNLMNNMTLPYLMDITLAFPSFVVRTEVEDSDV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2534 212 ProSitePatterns EF-hand calcium-binding domain. 116 128 IPR018247 -
Acco10g2534 212 ProSiteProfiles EF-hand calcium-binding domain profile. 147 182 IPR002048 GO:0005509
Acco10g2534 212 Pfam EF hand 72 93 IPR002048 GO:0005509
Acco10g2534 212 SUPERFAMILY EF-hand 18 201 IPR011992 -
Acco10g2534 212 Pfam EF-hand domain pair 106 175 IPR002048 GO:0005509
Acco10g2534 212 Gene3D - 16 210 - -
Acco10g2534 212 ProSiteProfiles EF-hand calcium-binding domain profile. 103 138 IPR002048 GO:0005509
Acco10g2534 212 PRINTS Recoverin family signature 121 139 - -
Acco10g2534 212 PRINTS Recoverin family signature 74 95 - -
Acco10g2534 212 SMART efh_1 151 179 IPR002048 GO:0005509
Acco10g2534 212 SMART efh_1 70 98 IPR002048 GO:0005509
Acco10g2534 212 SMART efh_1 107 135 IPR002048 GO:0005509
Acco10g2534 212 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Acco10g2534 212 PANTHER CALCINEURIN B 2 210 IPR045198 GO:0005509|GO:0019722|GO:0019900
Acco10g2534 212 FunFam calcineurin B-like protein 3 16 209 - -
Acco10g2534 212 CDD EFh 107 177 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2534 Acco-ChrAcco10 36516060 36517792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2534 1 209 EF-hand Containing Proteins AT4G17615 62.857 1.02e-95 276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2534 10 36516060 36517792 Acco10g2534 10 36516060 36517792 ECH