Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2350 ATGGTCCCCACTGAACCTAGCCGTCATCACGTCCAAGTTCCCTTTCTTTCGCGCTTCCTCGCTCGCGTTCTGCATATCTCTGACGCTACCAACTACCGTCCAGTGAAAGCATTTCTCCCCTGTTCCCGTATACCATCCAGGTTCATTCTCTTTTATCTCCCTCCCTCCCTCAGGCTATCCCTGATACTTCTTTATTCTCTTTCTTTCGGTTTTCCCGTTGTCCTATGGACACAGCTCAGCCTTCGTCTAGCCGACGCCGATCTCCCTTCCGCTACTTCCAGTGTTCCTGTTTCAGACGGTGTTGTCGTTGTTTCTGCTGTTTCTACTCCTACCCCTGAGCTAGTTTTCCTAACAAAAAGCTCTATCTCTCATTTCTTGAGGGCGTGTTGCAAGTCAGGAAATATGGATTTGTCGGGTGCTCAGTCGGGCCTATCTCTTGGCTTAAACGGACAGATTTCGTCACCGGCTTTGGCAGGCTATGTTGATGATAATTTAGCTTCCTTTCGACAGAATTCGAGCTTTGGTAGTTCCTCCAGTGCAACTCCTTTTGTTCCGTTGCAACTGCTCGAGGAAAAAGACGACAAGGTTAGGGTCAAATCCAGTGAAGAAACGGAGGAGGAGGAGGAGGAAGAGGAAGGAGCAGTGGAAGATGAAGCGATCGACTTTATGGGTCGGCCTATGTGTGCGAAGAGGAAATTAGAGGGACATCCGAATTTCGCTTCGAATCCTCCAAAGCGGCTTGCTGTCGATTGGGGGCTTGACGCGAGGCGAGCTTCAGTGCAGGCTTTGGCGAACCAGCCAATGGAGGTAGCTGACCCCGAGATTCATGAAATAATTGGGAAGGAAAGGCGGAGACAGTTCTCAGGAATAGAATTGATTGCTTCTGAGAATTTTGTTTGCAGAGCTGTCATGGAAGCTTTGGGAAGTCATTTGACGAACAAGTACTCTGAGGGAATGCCTGGAGCCAAATACTACACAGGGAATCAGTTTATTGATCAGATGGAATTGCTTTGCTGTAAGCGTGCACTGGCTGCCTTCGATCTCAATCCAAGCAAGTGGGGCGTGAACGTTCAGCCTTACTCATGTACTTCTGCCAACTTTGCCGTGTACACGGGTATTTTGCATCCAGGGGATCGAATCATGGGTCTGGATCTGCTATCCGGTGGGCATCTGAGTCATGGATATTATACCCACAGCGGAAAGAAGATTTCTGCGGCATCCATATTCTTTGAAACTCTTCCCTACAAAGTCAATCCTCTAACAGGCTACTTAGACTATGACAAGCTTGAAGAAAAAGCCTGCGATTATCGACCTAAACTGCTTATATGCGGAGGCAGCTCGTATCCCAGAGAATGGGATTATGCAAGGTTTAGAAAGATTGCTGATAAGTGTGGGGCTGTTTTGATGTGTGACATGGCTCATATTAGCGGCCTTGTGGCAGCTAAGGAAGTTGCTAGCCCGTTTGATTACTGTGATATTGTTACTTCAACCACCCACAAAAGTCTCCGAGGTCCAAGGGGAGGTATCATCTTTTATAGGAAAGGTTCAAAATCAAGGAAGCAAGGCCTGGCTCTTAATCATGGGGATGATGGTAATTATGACTTGGAGGAAAAGATAAACTTCGCTTTATATCCATCCTTACAAGGAGGCCCGCACAATAATCACATTGCTGCTCTTGCCATAGCCTTAAAACAAGTTGCAACTCCAGAGTACAAAGCATATATGCAACAGGTGAGGAAAAATGCACAGGCGTTGGCATCTGCTTTGCTGAAAAGAAAGTGCAGACTGGTAACTGATGGCACCGACAATCACTTGTTGCTCTGGGACCTTACTGCACTCGGCTTACTTGATAGAAACTATGAGAAGGTATGTGAGGCTTGTAATATCACTCTCAACAAATGTGCCATTTATGGTTCTATTTCACCTGGAGGAGTGAGAATTGGTACTCCTGCAATGACAACAAGAGGCTGCTTAGAGGATGATTTTGAGATCATAGCTGATTTTCTTCTGAAGGCAGCACAGATTACCAGCAATATACAGAAGGAATATGGAAAATCTTGTAAAGATTTCCTCAAAGGTCTTCAAAATAACAAAGATATTGTTGAGCTCAGAAATCAGGTTGAGGCATTCGCTTCCGAGCTTCCAATGCCAGCATTTGATATTTGA 2166 0.4608 MVPTEPSRHHVQVPFLSRFLARVLHISDATNYRPVKAFLPCSRIPSRFILFYLPPSLRLSLILLYSLSFGFPVVLWTQLSLRLADADLPSATSSVPVSDGVVVVSAVSTPTPELVFLTKSSISHFLRACCKSGNMDLSGAQSGLSLGLNGQISSPALAGYVDDNLASFRQNSSFGSSSSATPFVPLQLLEEKDDKVRVKSSEETEEEEEEEEGAVEDEAIDFMGRPMCAKRKLEGHPNFASNPPKRLAVDWGLDARRASVQALANQPMEVADPEIHEIIGKERRRQFSGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAKYYTGNQFIDQMELLCCKRALAAFDLNPSKWGVNVQPYSCTSANFAVYTGILHPGDRIMGLDLLSGGHLSHGYYTHSGKKISAASIFFETLPYKVNPLTGYLDYDKLEEKACDYRPKLLICGGSSYPREWDYARFRKIADKCGAVLMCDMAHISGLVAAKEVASPFDYCDIVTSTTHKSLRGPRGGIIFYRKGSKSRKQGLALNHGDDGNYDLEEKINFALYPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVRKNAQALASALLKRKCRLVTDGTDNHLLLWDLTALGLLDRNYEKVCEACNITLNKCAIYGSISPGGVRIGTPAMTTRGCLEDDFEIIADFLLKAAQITSNIQKEYGKSCKDFLKGLQNNKDIVELRNQVEAFASELPMPAFDI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2350 721 Pfam Serine hydroxymethyltransferase 269 668 IPR039429 -
Acco10g2350 721 Hamap Serine hydroxymethyltransferase [glyA]. 267 718 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Acco10g2350 721 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 492 508 IPR019798 GO:0030170
Acco10g2350 721 Gene3D Aspartate Aminotransferase, domain 1 272 717 IPR015422 GO:0003824
Acco10g2350 721 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 258 720 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Acco10g2350 721 MobiDBLite consensus disorder prediction 194 215 - -
Acco10g2350 721 SUPERFAMILY PLP-dependent transferases 256 719 IPR015424 -
Acco10g2350 721 Gene3D - 297 576 IPR015421 GO:0003824
Acco10g2350 721 CDD SHMT 272 710 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Acco10g2350 721 FunFam Serine hydroxymethyltransferase 297 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2350 Acco-ChrAcco10 35223379 35227946 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2350 10 35223379 35227946 Acco10g2350 10 35223379 35227946 ECH