Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2329 ATGGAGCTTTTTAACAACGATGATCTTAACTTCGTTGACGACGACTATTACGACGTCCCCGACTTTGAGGACGATGACCCTTTCGCCGACAAGCGCTCTCGCAGCAGCACTGTTTTTCATTCTCCGGACTCCGACTATGAAGATGATTTTGACGTGAGTCAATCGAAGACTGATACTTCTGCTCTGGAAGCCAGGAATGGGAAAGATATTCAGGGAATTCCTTGGGAGAGGCTTAATTATACCAGGGACAAATACCGTGAGACTCGACTAAAGCAGTACAAGAACTATGAGAATCTCTCTCGCTGTCGGGATGATCTTGACAAGGAGTACCTTGAAGTGAGGAAAGGAAATTCCTTCTACGACTTCCAGTTCAATACAAGGATCGTTAAATCAACAATAGTGCATTTTCAGCTGAGGAACTTGTTATGGGCAACATCGAAGCATGATGTATACCTTATGCAAAACTACTCTGTGATGCATTGGTCGTCTTTACTTCGGAAGAGTAAAGAAGTACTTAATGTGGTTAAACCCATTGTTCCAACTGTTAAGCACCCTGGATTTGTTGCTCAACCTATCTCCAGAGTACAAATAAGCACCATGGCTGTCGAGGAAAATTTAATGGTAGCGGGTGGTTTCCAGGGTGAGCTTATTTGCAAGAATCTGAATCAACCTGGAGTTGCTTTCTGTAGTAAAATAACTACCCATGATAATGGTATAACCAATGCTGTGGATGTTTTCCGTAATCCCAGTGGTTCTTTGAGGGTCATGACAGCAAATAATGACGCGCAGGTTCGGGTTTTTGATGCTGATGATTTTGCTTCTCTTGGTTGCTTCAAATATGACTGGTCTGTTAACAATATTTCCATTAGTCCCGATGGGAAGTTGTTAGCTGTTCTTGGAGATAGTACCGAGGGTTTGATAGCTGATGCTAACACCGGAAAGGTTACTGGGAGCCTGAAAGGACACTTGGACTATTGTTTTGCCTCAGCATGGCACCCAGATGGGCGAATACTGGCTACTGGAAATCAGGACACAACATGTAGGTTGTGGGACATTAGAAATCTTTCACGCTCCCTTGCTGTACTCAAGGGAAGAATGGGAGCAGTAAGAGCCCTAAGGTTCACTTCAGATGGACGGTTTCTGGCTATGGCCGAGCCTGCAGATTTCGTCCATATTTTTGACTCTCACAGTGATTATGAACAAGGACAAGAAATTGATTTATTTGGTGAGATCGCTGGTATTTCCTTCAGCCCCGATACGGAGGCTCTGTTTGTTGGGATAGCTGATCATACTTATGGAAGCTTATTAGAGTTCAATAGGAAACGTTGCAATCAGTACCTAGACTCCATGTTTTAG 1356 0.4366 MELFNNDDLNFVDDDYYDVPDFEDDDPFADKRSRSSTVFHSPDSDYEDDFDVSQSKTDTSALEARNGKDIQGIPWERLNYTRDKYRETRLKQYKNYENLSRCRDDLDKEYLEVRKGNSFYDFQFNTRIVKSTIVHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLRKSKEVLNVVKPIVPTVKHPGFVAQPISRVQISTMAVEENLMVAGGFQGELICKNLNQPGVAFCSKITTHDNGITNAVDVFRNPSGSLRVMTANNDAQVRVFDADDFASLGCFKYDWSVNNISISPDGKLLAVLGDSTEGLIADANTGKVTGSLKGHLDYCFASAWHPDGRILATGNQDTTCRLWDIRNLSRSLAVLKGRMGAVRALRFTSDGRFLAMAEPADFVHIFDSHSDYEQGQEIDLFGEIAGISFSPDTEALFVGIADHTYGSLLEFNRKRCNQYLDSMF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2329 451 SUPERFAMILY WD40 repeat-like 190 438 IPR036322 GO:0005515
Acco10g2329 451 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 319 354 - -
Acco10g2329 451 SMART WD40_4 225 268 IPR001680 GO:0005515
Acco10g2329 451 SMART WD40_4 271 309 IPR001680 GO:0005515
Acco10g2329 451 SMART WD40_4 355 394 IPR001680 GO:0005515
Acco10g2329 451 SMART WD40_4 312 351 IPR001680 GO:0005515
Acco10g2329 451 FunFam WD-40 repeat family protein 232 448 - -
Acco10g2329 451 ProSitePatterns Trp-Asp (WD) repeats signature. 338 352 IPR019775 -
Acco10g2329 451 ProSiteProfiles Trp-Asp (WD) repeats profile. 319 360 IPR001680 GO:0005515
Acco10g2329 451 Gene3D - 199 447 IPR015943 GO:0005515
Acco10g2329 451 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 6 448 - -
Acco10g2329 451 MobiDBLite consensus disorder prediction 25 52 - -
Acco10g2329 451 Pfam WD domain, G-beta repeat 314 351 IPR001680 GO:0005515
Acco10g2329 451 MobiDBLite consensus disorder prediction 22 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2329 Acco-ChrAcco10 35038920 35043905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2329 297 431 Miscellaneous Gene Families AT5G08390 31.333 2.28e-12 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2329 10 35038920 35043905 Acco10g2329 10 35038920 35043905 ECH