Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2258 ATGTATTGGAGGAAAATTGAAGAAGGAACGAATCAAGAAACGCACGACTTCGGAGACGTTGGTGCTGAAGAAAGGGAATGTTTGGAAGCTAGGATGACCCAGGAAAACTTAGGTCCTTGTATTCCTATTCCGTCGTCCACGTCTTTTCCCTCCAACACGGTGCTTCGTTTTGGAGGGTTGACGTGTACAACTCCAATTGCCGCAGATGAGGACGACCCGCTCTTTTGTCTTCATCACCATCGTTTCCGTTTCCTTGCATTTCTGATTCCTCATTTGGAAGACAAGACAGAAACCCACGCGCGCACAGAATCTCTGTTTTCACTTCCTCGCTTTCTCCTATTTCCTCTCTTTTCTTTTCGATTTCTGGCGAGGGAGATGGCGGTACTTCTCTACCCTACTCTCAGCCTGGGCCACCAGAGCATCAGCGTTCGCATGGCAGCAATGGCAATACGTTCAAATACCTGTCATCTCTTGCAGATTTTCAAGAATGGGCCACTTTACATATCTTCAAAAGGAATTGGATGGACGTCTTGGAAGAAACGGTGGTTTGTTTTAACATGCACTTCACTGGTTTTCTTCAGAAGTGATCCGAATATTATTCCTCAAAAGGGGGGTGAAGTGAATTTAACGCTTGGTGGCGTTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTGACTGTGCTTTTTCCTGATGGACGAGCTTTCACACTTAAGGCTGACACTGTAGAGGACTTACATGAATGGAAGACTGCACTTGAGAATGCTTTGGCCCTAGCCCCGGGTGCCTCTGATTTCATGTCCTGTGCAAACACTGTGTATGTTGCACATGATCTGTGTACTTATTCAGCTGTCAGCATGCTAATCTTTGTTGGAACAGATAATGCTGAGTTCTGTTTGTTTTCTGGTATGATCAATGCGAAGAATGTAGAACCACCAAAATCTACAGTTGTTGGCCTGCCAATTTTACTTGCTTTGGAGGAGGATGATGGAGCTCCTTCGTTTTTGGAGAAAGCACTGAGGTTCATAGAAGATCATGGTGAGTTTTATGTTTTTGTTTCTTTGAAGAATTCCTTTTGTTACTGCAATTTGATGAGACATCATAAATGGCATTTTATGCTGAGCGCACAGCTGTTCCTCCTCTTACGGATGTCCCTTTTAACATTGTTTACACATGACATAGGTTGTTTTTCATATGTATCTTCTGAATATTATAAACCAGGGGTCAAAGTTGAAGGGATCTTGCGACAGGCAGCTTCTGTTAATGATGTTGAATGTCGAGTTCGGGAATATGAACAGGGAAAAACTGAATTCTCTGCTGATGAGGATCCGCATGTTGTTGCCGATTGTCTGAAGTATGTACTCAGGGAATTACTTTCATCTCCAGTCCCTGCATCTTGCTGCAAGGCTCTGTTAGAAGCATGCCAGACTGAACGCGCTGGTAGGATTTCTGCTGTCCGTGCTGCAATATGTGAGACTTTCCCTGAACCAAATCGCCGTTTATTGCAAAGAATACTCCAAATGATGCAAACCGTGGCTTCCCACAAAACTGTGAATAGAATGAGCTCCCCTGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGTCCCCTTCTGGCTGGGGAATGTAACATTGAAAATGACTTCGATGTGGGTGGTGATGGTTCTGTCCAACTTCTACAAGCAGCCGCTGCCGCCAACCATGCTCAAATAATTGTTATGACATTATTAGAAGAATATGACGGCATATTTGGGGAGGAAGGATCTGGATCCCCAGGCATATACTCTGATTCGGAAGAGAGTGGATCTGGGAGCGAGGAGGGTACTGAAGATGATGAATCATATGACGATGATGATGATGAGTGTGATGAAGAATCAATACAAGAGTCCGATGCAGATGCAGATGCAGAGGGCAGTGAGATTGAAGACTCAGGCGGCGAGGATGATAAGAACCGTGATCTCTCAAGGTCAGACTTAAAACCCTCAGGTGACAAGGAAGATCCTAAAGTCAACCAGATATCATCACGGCCTATGGAAGTCTCACTATCTCAGGACGTTGACATCAAGAGCTGTGAAAATATGACGAGTTCAGCCAGGACTGCTCGTGCGGAGAAGTCCAGCACACCTGCAAACATAGTTGAAGTTGTTTCCACTGACCAGAGTACAGTACATAATTCAAGTTGTTCTATTGACAACAAATCAACAGACATATCTGATGATCCAGCACATGCTTCGAGCCACACAATATTGGGACGTACTTCTGCAATGAAGAGTCATGCCACGGAAACTACTGATTCTTCCACCAATGCAGCTGAGATGGAGAATCTTGAAGCTATCAAGGTAGAATTGCAAAACAAAATCACAGAGGAGTCTAACGCAAACCTGCAATCTTATCTGGAAAAACAAAAGAAATTCATGCATGAGCGCCGGCTGGCTCTTGCACAAGATGTGGCTAGACTACGGGAACAGTTGCAAAAGGAGAAGAATTATTGGGCAACTCTAGAAGCAGGGAACAAGTATTCTCCTGGATCCACATCCAATTCAACCAGTGATGAAAAGATTAAGGCAGACCTTGAGGAAATAGCTCTCATAGAAGCAGATCTCACTAAGTTATGGCAGCGGATCGATGATGTTGGCAGGAGGTTTAATGTACAACATGAGCACACTTCAAATCACGAAACAACATTGAAGAATAAGCTGGATACCGAAGATGCAGTTACTTCTCAGTCTCAGATTGAAAGGTCAAAACGCAAGGACGTTCAGTTTGGTGGAACCGAAAGTGAGAATGAGAAAAAGTCGGTACCAACATCTTTGCTGAACAAATATGCACCTCAAGCTACTCCCAAAAAAGTTGGGGCAAAGGTCGAGGTATCAAACTTCACTACTTCTAGACTGACTAAGCTGTCCACCAGACTAAACTTTCTGAAGGAGCGTCGAAATCAAATTCAGCAGTCACAGCCACCTCTCAATAATAAGCCTCGAGGATCTGAAGCTCATTCTGTGTCTAACCCAGAAAAGGGTAGAGCCATGGACAGTTCCCAGCCACCCTCAATCGCAGATAAAAGTTCGGGCAAAGAACCTGAATCGCTCCAAAATTCAGACAAAATGAGAAAATCAGACGGTCAGTCAACCTTCCATCCAGATAAATGGAAAGAGGAAGGTCATCAGTCTTATAATGTGGATAAAGGTCGATAA 3210 0.4421 MYWRKIEEGTNQETHDFGDVGAEERECLEARMTQENLGPCIPIPSSTSFPSNTVLRFGGLTCTTPIAADEDDPLFCLHHHRFRFLAFLIPHLEDKTETHARTESLFSLPRFLLFPLFSFRFLAREMAVLLYPTLSLGHQSISVRMAAMAIRSNTCHLLQIFKNGPLYISSKGIGWTSWKKRWFVLTCTSLVFFRSDPNIIPQKGGEVNLTLGGVDLNNSGSVVVKADKKLLTVLFPDGRAFTLKADTVEDLHEWKTALENALALAPGASDFMSCANTVYVAHDLCTYSAVSMLIFVGTDNAEFCLFSGMINAKNVEPPKSTVVGLPILLALEEDDGAPSFLEKALRFIEDHGEFYVFVSLKNSFCYCNLMRHHKWHFMLSAQLFLLLRMSLLTLFTHDIGCFSYVSSEYYKPGVKVEGILRQAASVNDVECRVREYEQGKTEFSADEDPHVVADCLKYVLRELLSSPVPASCCKALLEACQTERAGRISAVRAAICETFPEPNRRLLQRILQMMQTVASHKTVNRMSSPAVAACMAPLLLRPLLAGECNIENDFDVGGDGSVQLLQAAAAANHAQIIVMTLLEEYDGIFGEEGSGSPGIYSDSEESGSGSEEGTEDDESYDDDDDECDEESIQESDADADAEGSEIEDSGGEDDKNRDLSRSDLKPSGDKEDPKVNQISSRPMEVSLSQDVDIKSCENMTSSARTARAEKSSTPANIVEVVSTDQSTVHNSSCSIDNKSTDISDDPAHASSHTILGRTSAMKSHATETTDSSTNAAEMENLEAIKVELQNKITEESNANLQSYLEKQKKFMHERRLALAQDVARLREQLQKEKNYWATLEAGNKYSPGSTSNSTSDEKIKADLEEIALIEADLTKLWQRIDDVGRRFNVQHEHTSNHETTLKNKLDTEDAVTSQSQIERSKRKDVQFGGTESENEKKSVPTSLLNKYAPQATPKKVGAKVEVSNFTTSRLTKLSTRLNFLKERRNQIQQSQPPLNNKPRGSEAHSVSNPEKGRAMDSSQPPSIADKSSGKEPESLQNSDKMRKSDGQSTFHPDKWKEEGHQSYNVDKGR 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2258 1069 MobiDBLite consensus disorder prediction 679 773 - -
Acco10g2258 1069 Pfam PH domain 162 262 IPR001849 -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 592 773 - -
Acco10g2258 1069 Pfam Leucine-zipper of ternary complex factor MIP1 812 886 IPR025757 -
Acco10g2258 1069 Pfam RhoGAP domain 411 542 IPR000198 GO:0007165
Acco10g2258 1069 Gene3D - 151 264 IPR011993 -
Acco10g2258 1069 ProSiteProfiles Rho GTPase-activating proteins domain profile. 381 589 IPR000198 GO:0007165
Acco10g2258 1069 SMART RhoGAP_3 392 586 IPR000198 GO:0007165
Acco10g2258 1069 MobiDBLite consensus disorder prediction 984 1069 - -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 891 956 - -
Acco10g2258 1069 SUPERFAMILY PH domain-like 158 263 - -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 915 931 - -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 1032 1069 - -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 650 677 - -
Acco10g2258 1069 Coils Coil 970 990 - -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 608 649 - -
Acco10g2258 1069 Gene3D Rho GTPase activation protein 400 595 IPR008936 -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 1011 1031 - -
Acco10g2258 1069 SUPERFAMILY GTPase activation domain, GAP 410 591 IPR008936 -
Acco10g2258 1069 SMART PH_update 160 265 IPR001849 -
Acco10g2258 1069 CDD RhoGAP 401 537 - -
Acco10g2258 1069 CDD PH 162 258 - -
Acco10g2258 1069 ProSiteProfiles PH domain profile. 159 263 IPR001849 -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 932 948 - -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 984 1003 - -
Acco10g2258 1069 MobiDBLite consensus disorder prediction 891 905 - -
Acco10g2258 1069 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 412 935 - -
Acco10g2258 1069 Coils Coil 778 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2258 Acco-ChrAcco10 34521264 34532089 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2258 10 34521264 34532089 Acco10g2258 10 34521264 34532089 ECH