Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2256 ATGGACCTCAAGTTCTTCCCCTCCTTCCTTCTTTTCTCTGCAATAACTCACATCCTCATCGTAACCACCATTGCTTCAGACCTCTGTGCCTCTGAACCCTTCCACTTCGACGTCAACCTCATTCCCATTTACTCTAAATGCTCCCCTGTCAAACTTCCCAACACTACTGACTCATTATTTAACACCGTCATGGTCATGGCCTCCACAGATTCACAACGCCTCGCTTACTTATCTTCTCTTCTTGCTAATAAACGCTCAACCTCTGCCCCTGTTGCCTCTGGCCAGGCTCTCAGTATCGGTAACTACGTCGTCCGGGCCAAGCTCGGCACTCCCGGTCAGCTCATGTTCATGGTCTTAGACACGAGCAGCGATGAGGCCTGGGTCCCATGTACCGGTTGTAACGGTTGCTCCGCCATCACTTTTTCACCCAAAGCTTCTACTACTTTCAGGTCATTGGATTGCTCTGTTCCGCAATGCAGTCAGGTCCGTGGATTCTCTTGCCCCGGAACAAGATCCGACCCGTGTTTGTTTAACCATTCGTACGCTGGTTCATCCTTCTCCGCCACTCTGGTCCAAGATTCTCTCAGACTAGCATCTGACGTCATCCCCAATTACGCCTTCGGCTGCGTCAATAACGTCAACGGCGGTCCAATTCCCTCCCAAGGACTACTGGGTCTGGGTTGGGGACCCGTATCATTGTTTTCTCAAGTCGGGTCGCTTTACAGAGGAGTTTTCTCCTACTGCCTTCCCAGTTTTAGGTCATACTTCTTCTCTGGGTCGCTGAAGCTCGGCCCCAAAGGTCAGCCCAAACGCATCCGCACCACCCCACTATTACGTAATCCCCGCCGGCCGTCTCTGTACTACGCGAACTTGACCGGAGTCAGCGTGGGTCGGGCCCTTGTCCGGTTACCTAGTGAGCTTCTGAGCTTCAACCCTTACACCGGAGCCGGAACCATCATAGATTCGGGTACGGTGATTACCCGATTCGTGGGACCAGTGTATAACGCAATCAGGGACGAGTTCAGAAAACAAGTGAGAGGTCCTTTTACGAGCTTGGGGGCATTTGACACTTGCTTTGAGAAGACTTATGAGACAGTGGCACCCATTATTACATTTCACTTCTCAGAGCTGGATCTGGTATTGCCATTGGAGAACAGCTTCATACATAGCAGTTCGGGTTCACTGGCCTGCTTGGCAATGGCGGCGTCACCCAATAATGTGAACTCGGTGTTGAATGTGATAGCCAATTTGCAGCAGCAGAACCTTAGGATTTTGTTTGATACTGTCAATAATAAGGTTGGCATAGCTCGTGAGCTCTGTAACTAG 1326 0.5083 MDLKFFPSFLLFSAITHILIVTTIASDLCASEPFHFDVNLIPIYSKCSPVKLPNTTDSLFNTVMVMASTDSQRLAYLSSLLANKRSTSAPVASGQALSIGNYVVRAKLGTPGQLMFMVLDTSSDEAWVPCTGCNGCSAITFSPKASTTFRSLDCSVPQCSQVRGFSCPGTRSDPCLFNHSYAGSSFSATLVQDSLRLASDVIPNYAFGCVNNVNGGPIPSQGLLGLGWGPVSLFSQVGSLYRGVFSYCLPSFRSYFFSGSLKLGPKGQPKRIRTTPLLRNPRRPSLYYANLTGVSVGRALVRLPSELLSFNPYTGAGTIIDSGTVITRFVGPVYNAIRDEFRKQVRGPFTSLGAFDTCFEKTYETVAPIITFHFSELDLVLPLENSFIHSSSGSLACLAMAASPNNVNSVLNVIANLQQQNLRILFDTVNNKVGIARELCN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2256 441 PANTHER ASPARTYL PROTEASES 34 434 IPR001461 GO:0004190|GO:0006508
Acco10g2256 441 Gene3D Acid Proteases 264 441 IPR021109 -
Acco10g2256 441 Pfam Xylanase inhibitor C-terminal 287 436 IPR032799 -
Acco10g2256 441 ProSiteProfiles Peptidase family A1 domain profile. 102 436 IPR033121 -
Acco10g2256 441 FunFam Aspartyl protease AED3 265 441 - -
Acco10g2256 441 FunFam aspartyl protease AED3 81 264 - -
Acco10g2256 441 Pfam Xylanase inhibitor N-terminal 102 264 IPR032861 -
Acco10g2256 441 SUPERFAMILY Acid proteases 96 440 IPR021109 -
Acco10g2256 441 Gene3D Acid Proteases 78 263 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2256 Acco-ChrAcco10 34517056 34518381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2256 81 441 Miscellaneous Gene Families AT1G77480 28.288 4.34e-19 87.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2256 10 34517056 34518381 Acco10g2256 10 34517056 34518381 ECH