Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco10g2160 | ATGGAAGACGCTGCAAATTTTGCCAACTCCGGCAATTTATCTCGTAAAGTAGCCGCCCTAGCGGCCGGCGAAGCACATACTCTAGCTCTAACCGGGGATGGGTGCGTATATTCTTGGGGAAGAGGAATATTGGGGCGACTTGGTCGAGGCTCAGAAGAGGACGAGCTTTTTCCTGTTCCGCTCAAGTTTGAGAACCCTAATTCAACAGGAGACACTATCAAAATTGTGGGAATTGCTGCCGGTGCCTATCATAGTCTTGCTCTTGCAGATGATGGGTCAGTCTGGTGCTGGGGCTACAATATCTATGGTCAACTCGGTGTTACCGAAGAGGACTCCCATGACTCTAGTGGAGATAAGTCTCTAGTTCCCTGCCTATTAAGAAAGTTTATTGAGTTGCACCCTCCTGATTCTTCAACAGACACACCAGAAGAAGAAAGTAAGGCATCACTAAAGATATGCTCTGTCAAAGCAGGAGGAATGATGTCTCTGGCTATTGATAGCCTAGGGGCCCTATGGATGTGGGGAAACTGCCCACAGAAAAGCAAAGAAGGAGGGTTCTCTCTTGTGAGCAGTTTCATTCCCACACCAGTATGGGATTTTCATGGCCATACTGTCGTCAAGATTGCATGTGGAAACGAGCATGTTGTGGCACTAGTTAGTGCAGGAGAATCATACGTAGGCGAAGACCTCGTGTGCTACTCTTGGGGTAATAACAGCCATGGTCAATTAGGTTTGGGGGATAGAGAAAGCAGGCCAAATCCAGAAGTTGTAAAATCATTTGACCAGGAGTCCCCTTGGTCAATTTATGAGGTAGCTTGTGGTGCCTTTCACACTGCTTTGCTCACTCGCAAAAAGGGCCCCAGTGACACATCAGCAAGCATGTGCTGGACGTTTGGCCTTGGGGATAATGGGCAACTTGGGCATGGAACCACACAAAGCGAATTGCTTCCTGTGCCTGTCAAAGAATTGCCACAGCATGTACATCTAATTTCTGTTGACTGTGGCTTGTTTCATACCAGTGTTGTTTCATCAGCTGGTGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGTTTGTGTCCTGATGCTACTTTTGCTGGAACTGATTCTGGGGACGCACTATCACCCCTTCTTATCTCATGCACGCCATATCAGCCAAGGTTTCCAGATCCGATCCAAATTGCTTGTGGAGCTGCGCATACCGTTATTGTTGCACAGGGGGGGTATAAGATTTGGTCTTGGGGTAGGGGAAGGAGTGGGGTTCTGGGAAATGGTAAGGCAGTGGATTTTTACACTCCCACACTAGTGTTATGGCCTCCTCTGGTAGAGGATTTCAAGCAAGAGGAGCAGAAGAGTAGTGGAGAAAAAGAAACTGAAGCAGTCACAGAAATTGATGGGAAATTCGCGTCAGCATTAAATGAACTGAAGCTGCTTCAGACAAGGTTTTCTGTGATGGAGAGATATGCAAGTATACTTCATGGTTCAATATTTGGAAAACCTTTTGATGAGAGTGATATCCCAGTGTCATTGAGGAACTCGGGTGTATTCGACATTGCAAAGGAATGGGAGAGCATGTTAGAGGAAGCAGATCATAGTAAGCTAATTAGGTTGGAAAAGTTCTACAGAAACATGATTACTGGTGTGAAAGATAAACTAATGAAGAGAAGGATCATGGAGATGATAAAGGAATGCCTCCCGGCTTCGGAATTTGCAAAATAG | 1719 | 0.4631 | MEDAANFANSGNLSRKVAALAAGEAHTLALTGDGCVYSWGRGILGRLGRGSEEDELFPVPLKFENPNSTGDTIKIVGIAAGAYHSLALADDGSVWCWGYNIYGQLGVTEEDSHDSSGDKSLVPCLLRKFIELHPPDSSTDTPEEESKASLKICSVKAGGMMSLAIDSLGALWMWGNCPQKSKEGGFSLVSSFIPTPVWDFHGHTVVKIACGNEHVVALVSAGESYVGEDLVCYSWGNNSHGQLGLGDRESRPNPEVVKSFDQESPWSIYEVACGAFHTALLTRKKGPSDTSASMCWTFGLGDNGQLGHGTTQSELLPVPVKELPQHVHLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDATFAGTDSGDALSPLLISCTPYQPRFPDPIQIACGAAHTVIVAQGGYKIWSWGRGRSGVLGNGKAVDFYTPTLVLWPPLVEDFKQEEQKSSGEKETEAVTEIDGKFASALNELKLLQTRFSVMERYASILHGSIFGKPFDESDIPVSLRNSGVFDIAKEWESMLEEADHSKLIRLEKFYRNMITGVKDKLMKRRIMEMIKECLPASEFAK | 572 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco10g2160 | 572 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 271 | 281 | IPR000408 | - | |
| Acco10g2160 | 572 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 92 | 168 | IPR000408 | - | |
| Acco10g2160 | 572 | SUPERFAMILY | RCC1/BLIP-II | 13 | 322 | IPR009091 | - | |
| Acco10g2160 | 572 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 346 | 407 | IPR000408 | - | |
| Acco10g2160 | 572 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 230 | 284 | IPR000408 | - | |
| Acco10g2160 | 572 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 233 | 281 | IPR000408 | - | |
| Acco10g2160 | 572 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 296 | 341 | IPR000408 | - | |
| Acco10g2160 | 572 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 91 | 165 | IPR000408 | - | |
| Acco10g2160 | 572 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 33 | 88 | IPR000408 | - | |
| Acco10g2160 | 572 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 169 | 221 | IPR000408 | - | |
| Acco10g2160 | 572 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 293 | 345 | IPR000408 | - | |
| Acco10g2160 | 572 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 16 | 126 | - | - | |
| Acco10g2160 | 572 | SUPERFAMILY | RCC1/BLIP-II | 267 | 436 | IPR009091 | - | |
| Acco10g2160 | 572 | Gene3D | - | 4 | 227 | IPR009091 | - | |
| Acco10g2160 | 572 | Gene3D | - | 228 | 463 | IPR009091 | - | |
| Acco10g2160 | 572 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 78 | 88 | IPR000408 | - | |
| Acco10g2160 | 572 | PRINTS | Chromosome condensation regulator RCC1 signature | 75 | 88 | IPR000408 | - | |
| Acco10g2160 | 572 | PRINTS | Chromosome condensation regulator RCC1 signature | 94 | 110 | IPR000408 | - | |
| Acco10g2160 | 572 | PRINTS | Chromosome condensation regulator RCC1 signature | 169 | 185 | IPR000408 | - | |
| Acco10g2160 | 572 | PRINTS | Chromosome condensation regulator RCC1 signature | 208 | 224 | IPR000408 | - | |
| Acco10g2160 | 572 | PRINTS | Chromosome condensation regulator RCC1 signature | 404 | 425 | IPR000408 | - | |
| Acco10g2160 | 572 | PRINTS | Chromosome condensation regulator RCC1 signature | 335 | 353 | IPR000408 | - | |
| Acco10g2160 | 572 | PRINTS | Chromosome condensation regulator RCC1 signature | 35 | 51 | IPR000408 | - | |
| Acco10g2160 | 572 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 34 | 91 | IPR000408 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco10g2160 | Acco-ChrAcco10 | 33743296 | 33745892 | Dispersed/Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Acco10g2160 | 10 | 33743296 | 33745892 | Acco10g2160 | 10 | 33743296 | 33745892 | ECH |