Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2100 ATGAATATGGGACCTTCTCCTATATGTTTCTCGGGCATTACTCCAGTGTCGGATAATTTGCTTATAAACAGTAGATTAAAAACTCTGTTTGTTTTCCCCTTGTATTCGTTTCTCGGCATCTCGAACATCCACTCTACTGGATCAATCTCCGTCGTGGTGTTAGGTCAAAGATTATCGAAACATTTCGCCTCTCTTCGAATCACGATGGATCATAACACCGATATCAGCGCCGCTCATTCCATGGGAACGACCATCATCGGCGTCACTTACAACGGCGGTGTCGTTCTCGGGGCTGACTCTCGAACCAGCACCGGAGTATATGTTGCGAACCGGGCATCAGACAAAATTACGCAGTTGACCGACAATGTCTATGTTTGTCGCTCTGGATCGGCTGCTGATTCTCAGATTGTATCTGATTATGTGCGCTACTTCCTTCACCAGCATACAATACAGCTGGGACAACCTGCAACAGTAAAAGTTGCTGCAAATCTTGTCAGACTTCTCTCCTATAACAACAAGAATTTCTTAGAGACTGGTTTAATTGTTGGTGGATGGGACAAATATGAAGGCGGTCAAATCTACAGTGTTCCTCTTGGTGGAACTATAGTTCAACAACCTTTTGCAATTGGAGGATCTGGCTCCAGTTACTTGTATGGATTCTTTGACCAAGCATGGAAGGAAGGAATGACCCAAGATGAAGCTGAGGACTTGGTTAAAAAGGCGGTTTCACTTGCCATTGCACGTGATGGTGCTAGTGGGGGTGTTGTCCGAACAGTTATTATAAATTCAGAGGGAGTTACTAGGAAGTTCTATCCTGGGGACCAACTTCCTCTGTGGCATGAGGAGCTGGAGTCGCACAACTCACTGCTGGACGTCCTTGGTACCCCTGAGCCGATGAGCATCTGA 906 0.4603 MNMGPSPICFSGITPVSDNLLINSRLKTLFVFPLYSFLGISNIHSTGSISVVVLGQRLSKHFASLRITMDHNTDISAAHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEGGQIYSVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTQDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTRKFYPGDQLPLWHEELESHNSLLDVLGTPEPMSI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2100 301 PRINTS Proteasome component signature 90 105 IPR000243 GO:0004298|GO:0005839|GO:0051603
Acco10g2100 301 PRINTS Proteasome component signature 247 258 IPR000243 GO:0004298|GO:0005839|GO:0051603
Acco10g2100 301 PRINTS Proteasome component signature 211 222 IPR000243 GO:0004298|GO:0005839|GO:0051603
Acco10g2100 301 PRINTS Proteasome component signature 222 233 IPR000243 GO:0004298|GO:0005839|GO:0051603
Acco10g2100 301 ProSitePatterns Proteasome beta-type subunits signature. 86 133 IPR016050 GO:0005839|GO:0051603
Acco10g2100 301 CDD proteasome_beta_type_6 83 270 - -
Acco10g2100 301 PANTHER METALLOPROTEASE TLDD 71 277 IPR023333 -
Acco10g2100 301 FunFam Proteasome subunit beta 83 282 - -
Acco10g2100 301 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 64 279 IPR029055 -
Acco10g2100 301 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 83 282 IPR029055 -
Acco10g2100 301 ProSiteProfiles Proteasome beta-type subunit profile. 82 261 IPR023333 -
Acco10g2100 301 Pfam Proteasome subunit 81 261 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2100 Acco-ChrAcco10 33254758 33259907 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2100 10 33254758 33259907 Acco10g2100 10 33254758 33259907 ECH