Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2027 ATGGCTGCCTGCGAATCATCACAAGTAAAAGAAAAGTGTGAGTTGGTTCCAGGGCCTATCATTGTAGGTGCTGGACCTTCCGGTTTAGCTGTCTCCGCTTGCCTTTCTCAACAATATCGAGTACGTTCACTTATTCTTGAGAGAAGTGATTGTATTGCCTCTCTTTGGAAGAACAAAACCTACGATCGTCTCAGGCTTCATCTTCCTAAAGAATTTTGCGAGCTTCCATTAATGGGTTATCCTGAAAATTTTCCCAAGTATCCTGACAAGTTTCAGTTCATCTCATACTTAGAGTCATACGCTTCACGTTTCTCTATTCACCCCCGGTTCAACCAAAACGTTCAAGATGCCCGGTTCGACCGAACCTCCAGTTTATGGATCGTTCGAACTCAGGATTGCGTCTACATTTCTCGGTGGATCGTCGTGGCGACCGGCGAGAATGCCGAATCCTTTATTCCTAAGATCGTCGGGCTGGAGAAATTTCACGGACCGGTCCTTCACACTATCGATTATCGGTCTGGCTCTGAGTATAGGAACAAGAAGGTTCTGGTTATAGGTTGTGGCAATTCTGGCATGGAAGTCAGCTTGGATCTCAGCAAAAACAGTGCAAAAGCTCACATTGTTGTTAGAAATGCCGTCCATGTTCTCCCTCGAGAAATGTTTGGGTTCTCAACGTTCGGACTAGCTATGACCCTCCTTAAATGGTTTCCATTAAGACTAGTAGACATGATCCTCTTACTCATGGCTTATTTAACCATGGGAAGCACCGATCACTACGGTCTCCGGCGACCCAAAATTGGCCCAATGGAGATGAAATGCATCGCCGGAAGAAGCCCTGTTCTCGACGTCGGCACTCTAGGAGAGATCAAAGCTGGGAGAATCAAGGTGGAGGATGACGTGAAGGAGATAACGAGAAATGGTGCCAGAATGATGAATGGACAAGAAGAGAAGTTCGATGCTATAATATTGGCAACAGGATACAAAAGTAACGTGCCTAGTTGGCTCAAGAGCTGTGAATTTTTCACCTCGGAGGGGATGCCAAAAACGCCGTTTCCAGATAACTGGAAGGGAGGTAATGGATTGTATGCGGTGGGGTTCACAAGAAGAGGCATCCTTGGAACCGCCTCAGATGCTCTGAAGATCGCCGGCGACATCGCCGACCAATGGCGGAGTGTTAAGGCCCAGGAGAAATACTGCGGTCCACAAACTATATATCCCAGTTAA 1224 0.469 MAACESSQVKEKCELVPGPIIVGAGPSGLAVSACLSQQYRVRSLILERSDCIASLWKNKTYDRLRLHLPKEFCELPLMGYPENFPKYPDKFQFISYLESYASRFSIHPRFNQNVQDARFDRTSSLWIVRTQDCVYISRWIVVATGENAESFIPKIVGLEKFHGPVLHTIDYRSGSEYRNKKVLVIGCGNSGMEVSLDLSKNSAKAHIVVRNAVHVLPREMFGFSTFGLAMTLLKWFPLRLVDMILLLMAYLTMGSTDHYGLRRPKIGPMEMKCIAGRSPVLDVGTLGEIKAGRIKVEDDVKEITRNGARMMNGQEEKFDAIILATGYKSNVPSWLKSCEFFTSEGMPKTPFPDNWKGGNGLYAVGFTRRGILGTASDALKIAGDIADQWRSVKAQEKYCGPQTIYPS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2027 407 SUPERFAMILY FAD/NAD(P)-binding domain 20 212 IPR036188 -
Acco10g2027 407 Gene3D - 19 394 IPR036188 -
Acco10g2027 407 SUPERFAMILY FAD/NAD(P)-binding domain 180 391 IPR036188 -
Acco10g2027 407 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Acco10g2027 407 PRINTS FAD-dependent pyridine nucleotide reductase signature 19 38 - -
Acco10g2027 407 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 21 393 - -
Acco10g2027 407 FunFam Flavin-containing monooxygenase 19 394 - -
Acco10g2027 407 PRINTS Pyridine nucleotide disulphide reductase class-II signature 18 40 - -
Acco10g2027 407 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
Acco10g2027 407 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 146 - -
Acco10g2027 407 Pfam Flavin-binding monooxygenase-like 21 333 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2027 Acco-ChrAcco10 32778014 32780436 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2296 05 38904366 38907399 Acco10g2027 10 32778014 32780436 CCT
Acco10g2027 10 32778014 32780436 Acco10g2027 10 32778014 32780436 ECH