Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1983 ATGAAGCACACTTCGCCTGAGGCTGCTCCATCTTTATCTTCTGCACCCTCTTCAACAACGGACCAGTCACATGTTGCCTCTTCGTCGTCGTCGTTGGCTTCGCTGGACAAACCTGTTTTAGGTTCGTCCGCCCCTGCTCAGGAGGATCTGGCTATGGGGTCTAGGGACGGAGGCGGCGCCCAGCAGTCCGTGACCATCGAACGCCGGGGCGACTACTCGGCCGTTTGCCGATGGACAGTTCACAATTTTCCACGAATAAAAGGTAGGGCGTTATGGAGCAAGTACTTTGAGGTCGGAGGGTATGATTGCCGTCTCTTGATATACCCCAAGGGTGACTCTCAGGCTTTGCCTGGCTATATCTCCATCTACCTCCAAATCATGGACCCTGGGGCCACTTCCTCGTCCAAATGGGACTGTTTTGCTAGCTACCGTTTGGCAATCGTGAATGTCGCCGACGATTCTAAGACCATTCATCGGGATTCGTGGCATCGGTTCTCAAGTAAGAAGAAATCACACGGGTGGTGTGATTTCACGCCCTCTACAACAGTTTTGGATCCAAAATTGGGCTACTTATTTAATGGCGATTCGGTATTGATAACCGCTGATATTCTTATTCTTAACGAGTCCATTAATTTTACTCGAGACAACAATGAGCCGCAATCATCGGCATCTTCTTCTTCATCCATGGTATCTTCCTCTGTTGTCGCAGGCCCTGTGTCCGACGTGTTGAGTGGAAAATTCACTTGGAAAGTGCATAATTTCAGTTTATTTAAGGAGATGATAAAAACACAGAAGATAATGAGCCCCGTTTTTCCAGCTGGGGAGTGTAATTTGAGGATTAGTGTCTATCAGAGCTCGGTTAATGGAGTCGAATATCTGTCAATGTGCTTGGAAAGCAAGGATACGGACAAGACAGTGATGTTGTCCGATAAGAGTTGCTGGTGTTTATTTCGAATGTCAGTCTTAAACCAGAGGCCAGGTTCGAATCACATGCACAGGGATTCGTATGGACGGTTTGCAGCTGATAATAAAAGCGGTGATAATACAAGCTTGGGATGGAATGATTATATGAAGATGTCAGATTTTATTGGGCCTGATTCAGGGTTTCTGGTGGATGACACTGCAGTTTTTAGTACGTCATTTCATGTGATTAAAGAGTTAAGTAGCTTCTCTAAGAATGGGGCTTTAATTGCAGGAAGAATTGGGAGTGGCGCAAGGAAATCAGATGGTCATATGGGTAAGTTTACTTGGAGGATTGAAAACTTCACAAGAGTAAAGGATTTATTGAAGAAGAGAAAAATAACTGGTCTTTGCATCAAGAGCCGGAGGTTTCAAATTGGTAACCGGGATTGTCGTCTCATTGTATATCCCCGAGGGCAGTCTCAGCCTCCTTGCCACCTTTCTGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGCTTTGTTAGCCATCGGTTGTCAGTTGTGAACCAGAAGATGGAGGAGAAGTCTGTTAGCAAGGAATCACAGAACCGCTACTCCAAGGCTGCAAAAGATTGGGGCTGGCGTGAATTTGTGACCCTCACTAGCCTCTTTGATCAAGATTCGGGTTTTCTTGTCCAGGATACTGTTGTATTCTCAGCAGAAGTTCTTATATTGAAAGAGACATCTATAATGCAGGATTTGATTGATTACAATTCTGAGTTGAGTAGTAGTAGTTCCTTTACTGATAGTTATGTAAACAGAAGGACATTTACATGGAAAGTGGAGAATTTCCTGTCATTTAAGGAAATAATGGAGACTCGAAAGATCTTCAGTAAATTTTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGTGTATGAGTCCTTTGACACCATATGTATTTATCTAGAGAGCGATCAGGCTGTTGGTAGTGATCCAGATAAAAACTTTTGGGTTAAATACAGGATGGCTGTTGTGAATCAAAAGAATCCCGCCAAGACAGTGTGGAAGGAATCCTCTATTTGTACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATATTGGAAGCAGATGCAGGGTTTCTTGTCCGTGACACTGTTGTTTTTGTCTGTGAAATATTGGATTGCTGCCCTTGGTTTGATTTTTCAGACTTAGAGGTTTTAGCTTCAGATGATGATCAGGATGCTTTGACAACTGATCCTGATGAACTTGTTGATTCTGAAGACAGTGAAGGAATAAGTGGTGATGAAGAAGACATTTTTAGAAATCTTCTTTCTCGAGCTGGATTTCACCTAACATATGGAGATAATCCTTCACAGCCACAAGTTACTTTAAGAGAAAAGCTTTTAATGGATGCTGGGGCAATTGCTGGGTTTCTGACTGGACTGCGGGTATATCTCGATGATCCTGTGAAAGTAAAGCGTCTGCTTCTTCCAACCAAGCTCTCCAGTAGTTGTGAAGGAAAGAAGGTTGCTAAGGCCAATGAATCTTCCCCCAGTTTGATGAATTTGCTGATGGGAGTTAAGGTCTTACAGCAGGCAATCATTGATTTACTTTTGGATATAATGGTGGAATGCTGCCAACCTTCTGAAGGGTATTGTGCTGCTGATTCTCCTGATACATGCTCAAAAACATCTCCTGATAGCAGTGGAGCTGCTAGTCCTGTTGAATGTGATAGAGAAAATGGGGCAGCAGAATCTGCTCAATTTCTTGTTGATGAGAGATTGGATTCTGCTGATGAAGAAAGTAGTGGTACATCTACTGTACAAAGCTCTGATTCAAACGGCAGTGTTATTCAGGAGAAAGCTTTTCCTGGACAACCTATTTTTCCACCTGAAACATCTGCTGTCGTATCAGAAAATCCATCCTTTCGGTCTAAGACCAAGTGGCCAGAACAGTCCGAGGAGCTCTTAGGTTTAATTGTAAACTCACTAAGAACCCTTGATGGGGCTGTTCCGCAAGGCTACCCTGAGCCACGTCGGCGTCCTCAGTCTGCACGCAAAATTTCTATTGTGATGGACAAAGCTCCTAAGCATCTGCAAGCTGACCTTGTAGCGCTGGTTCCCAAATTGGTTGAGCCTTCAGAACATCCACTAGCCGCCTGTGCACTTCTTGAGCGACTCCAGAAGCCAGATGCAGAACCTGCCTTGCGAATGCCTGTTTTTGAGGCTCTTAGTCAACTGGATTGTGGTAGTGAAGTGTGGGAACGTGTTCTATTCCAATCAGTTGAGCTTTTGGCCGACTCAAACGGTGAACCCCTTTCTGCAACTATAGATTTTATATTCAAAGCAGCAGCTCAATGTCAACATCTTCCTGAAGCAGTTAGATCTGTTCGTGTCAGACTAAAAAATCTAGGTCTTCAGGTTTCACCTGGTGTCCTTGACTTTTTGAGTAAGACTATTAATAGTTGGGGGGATGTTGCTGAAACTATACTGAGAGACATTGATTGTGATGATGACTTGAGTGACAGTTACTCAGCGCTGTCAAGTGGACTTTTCCTATTTGGTGAACATGGCACAAAACCAACTGGATTGAATGTGGTTGATGAACAGGCTTTCCCAGCTAGTTGTTATTTTTCTGATATTTACATACTGATCGAGATGCTATCAATTCCTTGTCTTGCTGTTGAAGCTTCTCAAACCTTTGAGAGAGCTGTAGCTCGAGGTGCAATTGGTGCTCAGTTTGTAGCGTTGGTTTTGGAGAAGCGTGCCTCCCAAAGATTGACTAATAATTCTGTAAATGCAGCTGAAAGTTTTCCATGTTCAGATGTTATTGCAGAGGGAAATGCCAATGAATCCTTTGGAGTTCAAAAAGATGATTTTACTTCAGTTCTTGGCCTTGCTGAAACATTAGCACTGTCCAGAGACCCATGTGTGAAAGAATTTGTGAAGTTACTCTATTTGATATTGTTTAGATGGTATGCTGATGAATCTTATCGTGGGACAATCCTCGAGAGGCTTGTTGGCCGTGCCACCAGTACTACAGATAATGGCCATGAAATAGATTTGGATATTTTAGTTACTTTGGCCTGTGAGGAGCAGGAAATTGCTAGACTTGTTTTGAGTATGATGCGGGAAGTTGCTGAACTTGCAAATGTTAATCGGTCTGCTCTATGGCACCAGTTATGTGCTAGCAAAGATGAAATCGTTCATCTTCGTGAAGAAATGAAAGCTGAAATTTCCAACATGGCTAAGGAAAAAGCTATTTTTACACAAAAACTGAGTGAATCGGAGGCCACAAGTATTCGTCTCAAGTCTGAGATGAGGGCTGAGATGGATCGGTTCGCTCGGGAGAAGAAAGATCTTGCTGAACAAGTACAAGAAGTTGAAAGTCAGCTTGAGTGGCTTCGTTCAGAGCGGGACGATGAAATAGCAAAGCTCTCTGCGGAGAAGAAAGCTCTTCAGGACCGTGTGCATGATGCAGAGGCACAACTCTCACTATTGAAGTCCCGGAAACGTGACGAATTGAAGAAAGTAGTCAAGGAAAAAAATTCACTTGCCGAAAGATTGAAGAGCGCTGAAGCTGCACGGAAGAGATTTGATGAAGAACTGAAAAGATATGCAACAGAAAATGTCACTCGGGAAGAAGTACGAAAATCACTTGAGGACGAAGTTCGTAGATTGACACAAACAGTTGGGCAAACTGAGGAAGAAAAGAGAGAGAAGGAACAGCAGGTTGCTAGGTGTGAAGCATACATTGATGGCATGGAATCAAAATTGCAGGCCTGTCAGCAATATATTCACACACTGGAAGCTTCACTTCAGGAGGAAATGTCACGGCATGCTCCTCTATACGGTGTTGGTCTGGAAGCTCTTTCAATGAAAGAGCTGGAAACACTGACACGCATCCACGAGGAAGGGCTAAGGCAGGTCCATGCCCTTCAACAGCGGAAGGGCAGTCCAGCTGGCAGTCCTCTGGTGAGTCCACATGCCCTTCCTCCCCGCATTCATGGATTATTTCCCTCTGCCTCCCCTCCATTGCCTGTGGGACTCTCTCCATCACCCATTCCAAATGGGCTCCATTGCAATGGCCACGTCAATGGAGCTGTGGGGCCCTGGTTTAAACACACTTGA 5067 0.4405 MKHTSPEAAPSLSSAPSSTTDQSHVASSSSSLASLDKPVLGSSAPAQEDLAMGSRDGGGAQQSVTIERRGDYSAVCRWTVHNFPRIKGRALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPGATSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSTTVLDPKLGYLFNGDSVLITADILILNESINFTRDNNEPQSSASSSSSMVSSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDKSCWCLFRMSVLNQRPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGPDSGFLVDDTAVFSTSFHVIKELSSFSKNGALIAGRIGSGARKSDGHMGKFTWRIENFTRVKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVSKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDLIDYNSELSSSSSFTDSYVNRRTFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDILEADAGFLVRDTVVFVCEILDCCPWFDFSDLEVLASDDDQDALTTDPDELVDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPVKVKRLLLPTKLSSSCEGKKVAKANESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGYCAADSPDTCSKTSPDSSGAASPVECDRENGAAESAQFLVDERLDSADEESSGTSTVQSSDSNGSVIQEKAFPGQPIFPPETSAVVSENPSFRSKTKWPEQSEELLGLIVNSLRTLDGAVPQGYPEPRRRPQSARKISIVMDKAPKHLQADLVALVPKLVEPSEHPLAACALLERLQKPDAEPALRMPVFEALSQLDCGSEVWERVLFQSVELLADSNGEPLSATIDFIFKAAAQCQHLPEAVRSVRVRLKNLGLQVSPGVLDFLSKTINSWGDVAETILRDIDCDDDLSDSYSALSSGLFLFGEHGTKPTGLNVVDEQAFPASCYFSDIYILIEMLSIPCLAVEASQTFERAVARGAIGAQFVALVLEKRASQRLTNNSVNAAESFPCSDVIAEGNANESFGVQKDDFTSVLGLAETLALSRDPCVKEFVKLLYLILFRWYADESYRGTILERLVGRATSTTDNGHEIDLDILVTLACEEQEIARLVLSMMREVAELANVNRSALWHQLCASKDEIVHLREEMKAEISNMAKEKAIFTQKLSESEATSIRLKSEMRAEMDRFAREKKDLAEQVQEVESQLEWLRSERDDEIAKLSAEKKALQDRVHDAEAQLSLLKSRKRDELKKVVKEKNSLAERLKSAEAARKRFDEELKRYATENVTREEVRKSLEDEVRRLTQTVGQTEEEKREKEQQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGVGLEALSMKELETLTRIHEEGLRQVHALQQRKGSPAGSPLVSPHALPPRIHGLFPSASPPLPVGLSPSPIPNGLHCNGHVNGAVGPWFKHT 1688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1983 1688 Coils Coil 1384 1404 - -
Acco10g1983 1688 SUPERFAMILY TRAF domain-like 242 387 - -
Acco10g1983 1688 CDD MATH 77 203 IPR002083 GO:0005515
Acco10g1983 1688 CDD MATH 582 704 IPR002083 GO:0005515
Acco10g1983 1688 PANTHER TRAF-LIKE FAMILY PROTEIN 30 1688 - -
Acco10g1983 1688 MobiDBLite consensus disorder prediction 934 961 - -
Acco10g1983 1688 SUPERFAMILY TRAF domain-like 73 210 - -
Acco10g1983 1688 MobiDBLite consensus disorder prediction 908 927 - -
Acco10g1983 1688 CDD MATH 245 377 IPR002083 GO:0005515
Acco10g1983 1688 Coils Coil 1529 1556 - -
Acco10g1983 1688 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 404 557 IPR008974 GO:0005515
Acco10g1983 1688 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 240 387 IPR008974 GO:0005515
Acco10g1983 1688 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 567 706 IPR008974 GO:0005515
Acco10g1983 1688 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 60 209 IPR008974 GO:0005515
Acco10g1983 1688 MobiDBLite consensus disorder prediction 7 37 - -
Acco10g1983 1688 Pfam MATH domain 593 700 IPR002083 GO:0005515
Acco10g1983 1688 Pfam MATH domain 81 204 IPR002083 GO:0005515
Acco10g1983 1688 Pfam MATH domain 444 550 IPR002083 GO:0005515
Acco10g1983 1688 ProSiteProfiles MATH/TRAF domain profile. 244 381 IPR002083 GO:0005515
Acco10g1983 1688 MobiDBLite consensus disorder prediction 913 927 - -
Acco10g1983 1688 ProSiteProfiles MATH/TRAF domain profile. 580 704 IPR002083 GO:0005515
Acco10g1983 1688 MobiDBLite consensus disorder prediction 945 959 - -
Acco10g1983 1688 SUPERFAMILY TRAF domain-like 413 554 - -
Acco10g1983 1688 SMART math_3 249 362 IPR002083 GO:0005515
Acco10g1983 1688 SMART math_3 585 685 IPR002083 GO:0005515
Acco10g1983 1688 SMART math_3 417 529 IPR002083 GO:0005515
Acco10g1983 1688 SMART math_3 75 183 IPR002083 GO:0005515
Acco10g1983 1688 ProSiteProfiles MATH/TRAF domain profile. 73 203 IPR002083 GO:0005515
Acco10g1983 1688 SUPERFAMILY TRAF domain-like 581 705 - -
Acco10g1983 1688 Coils Coil 1416 1521 - -
Acco10g1983 1688 ProSiteProfiles MATH/TRAF domain profile. 412 548 IPR002083 GO:0005515
Acco10g1983 1688 CDD MATH 413 548 IPR002083 GO:0005515
Acco10g1983 1688 MobiDBLite consensus disorder prediction 868 890 - -
Acco10g1983 1688 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1983 Acco-ChrAcco10 32473316 32481578 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1983 10 32473316 32481578 Acco10g1983 10 32473316 32481578 ECH