Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1981 ATGGGCTTCATCAGTGGCATGATTATGGGCATAGCCTTTGGCATCATCTTGATCTTCGCTTTTTCTCGCTTCCAAAGTTACCGATCCAAATGTCGTTCCCATTTGGCGGAGGCCGTAGCAGCTTTAGCCAGGATGAAGACGATGGAAGATTCTAGAAGAATCATCCCACCAGAGTCCTGTCCTCCCTGGGTGTTAGATTGGCTCAATACCCATCTCCAGAAAATCTGGCCTTATGTTAATGAGGCAGCATCAGAGCTTATAAGAAACAATGTGGAGCCCATTCTTGAGAATTACACTCCCAAAATCTTGTCCTCAATCACATTTTCCAAGTTGACTCTTGGTACTGTGGCACCTCAATTCACAGGAGTGGCGATTGTTGAAGAAGAAAGTGGGGCTGATGGAGTGACTATGGAATTGGAGATGCAATGGGATGGTAACCCCACTATTGCATTTGATGTTAAAACTCGATTTGGCGTTGTGATACCTGTTAAGGTAAAAGATATTGGATTCACTGGCGTTTTCAGGCTGATCTTCAAACCATTAGTAGATGAGTTCCCTTCTTTAGGAGCTGTTTGTTATTCCTTGAGAGAAAAGAAACATCTAGACTTTACTCTTAAGGTTTCTGGCGGTGATATCTCAACTCTCCCAGGCGTATCTGATGCTATAGAGGCAACAATTCGAGATGCTATTGAGGATTCTATAACCTGGCCAGTTCGCAAAATTATACCAATTATACCAGGGGATTACAGCTTCCTTGAGTTAAAACCAGTTGGAACACTAGAAGTAAAACTAGTGCAAGCAAAAGACTTGGCAAATAAAGATCTGATAGGCAAATCCGATCCTTTTGCGATCTTATTCGTACGCCCAATTCGTGACAGAGTCCAAACCAGCAAAACAATAAACAACGAGTTGAACCCATTATGGAACGAGAACTTCGAGTTCATTATTGAAGATGCGTCAACTCAGCACTTGACTGTAAGAATATTTGATGAAGAAGGCCTTGGGGCTGATCAGCTCATTGGGTGTGCCCTGGTGCCATTAAAGGACCTTCAACCTGGAAAAGTTCAGACTTTTTGGTTGAAACTGGTCAAGGATTTGGAGGTCCAAAGAGATAAAAAATACAGGGGTGAGGTGCATTTGGAGTTATTGTACTGTCCATTTGGTGTTGAAAGCAACTTTACAAACCTGTCTAGTGGTGGCTTCGGGTTGACCACTTTCGAGAAGGCTCTTAAGAGATCTTCTGATCAGACACAGAGTGGTGATGTTAACAAATCACAGAAAAAAAATGTGATAGTACGAGGAGTACTGTCTGTGACAGTGATATCAGCTGAAGACCTACCAGATACAGACTTACTGGGCAAAGTTAACGCTTATGTTGTGCTCATTTTGAAGAAAGCAGATCAAAAACTCAGGACCAGGGTTGCAACTTCAGGGGTAAACCCTATTTGGAATCAAACATTTGACTTCGTTGTGGAGGATGCATTGCATGAAATGTTAATGCTTGAGGTCTGGGATCAAAATCTCATCGGGCAGGACAAAATTGGGAGAGTGACGATGACACTGACTCGGGTTATCCTAGAAAAGGAAGTTCAGGATAGTTTTGCGTTAGATGGAGCTAAATCTGGAAAACTTAACCTGCATCTTCAGTGGACTCCACAACTCATGTATCGAGATCCCTGA 1680 0.4274 MGFISGMIMGIAFGIILIFAFSRFQSYRSKCRSHLAEAVAALARMKTMEDSRRIIPPESCPPWVLDWLNTHLQKIWPYVNEAASELIRNNVEPILENYTPKILSSITFSKLTLGTVAPQFTGVAIVEEESGADGVTMELEMQWDGNPTIAFDVKTRFGVVIPVKVKDIGFTGVFRLIFKPLVDEFPSLGAVCYSLREKKHLDFTLKVSGGDISTLPGVSDAIEATIRDAIEDSITWPVRKIIPIIPGDYSFLELKPVGTLEVKLVQAKDLANKDLIGKSDPFAILFVRPIRDRVQTSKTINNELNPLWNENFEFIIEDASTQHLTVRIFDEEGLGADQLIGCALVPLKDLQPGKVQTFWLKLVKDLEVQRDKKYRGEVHLELLYCPFGVESNFTNLSSGGFGLTTFEKALKRSSDQTQSGDVNKSQKKNVIVRGVLSVTVISAEDLPDTDLLGKVNAYVVLILKKADQKLRTRVATSGVNPIWNQTFDFVVEDALHEMLMLEVWDQNLIGQDKIGRVTMTLTRVILEKEVQDSFALDGAKSGKLNLHLQWTPQLMYRDP 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1981 559 CDD SMP_SYT 61 244 - -
Acco10g1981 559 FunFam Extended synaptotagmin-2 413 554 - -
Acco10g1981 559 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 430 554 IPR035892 -
Acco10g1981 559 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 550 IPR045050 GO:0008289
Acco10g1981 559 Gene3D C2 domain 252 386 IPR035892 -
Acco10g1981 559 Gene3D C2 domain 416 553 IPR035892 -
Acco10g1981 559 SMART C2_3c 259 359 IPR000008 -
Acco10g1981 559 SMART C2_3c 435 533 IPR000008 -
Acco10g1981 559 Pfam C2 domain 434 532 IPR000008 -
Acco10g1981 559 Pfam C2 domain 258 362 IPR000008 -
Acco10g1981 559 ProSiteProfiles C2 domain profile. 239 360 IPR000008 -
Acco10g1981 559 ProSiteProfiles C2 domain profile. 418 534 IPR000008 -
Acco10g1981 559 CDD C2 436 532 - -
Acco10g1981 559 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 256 387 IPR035892 -
Acco10g1981 559 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 66 244 IPR039010 -
Acco10g1981 559 CDD C2 260 362 - -
Acco10g1981 559 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 61 245 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1981 Acco-ChrAcco10 32462306 32465343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1981 436 524 Lipid Metabolism Gene Families AT1G51570 34.831 1.34e-06 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1981 10 32462306 32465343 Acco10g1981 10 32462306 32465343 ECH