Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1901 ATGGTTATACGTAGAGAATCGCTGGCCATCATCTTGATATGGCTCGCTGTGTTTGATGGATGTTCAAACCTTGTACATGTCGTCAATGGCGAATTTAATTATAAAGAAGCTCTCACAAAATCCCTCATTTTTCTAGAGGCACAACGTTCAGGGAAGCTCCCTCCCAATAAGAGAGTGCCCTGGAGAGGAGACTCTGCACTTGACGACGGAAAACTCGCCAATGTGGACCTTTCTGGAGGATACTATGATGCAGGGGATAACGTCAAATATGGTTTCCCGTTGGCTTTCACAGTCACCACTCTTTCATGGGCTGCAGTTTATTTCAAGGACGAGATTCGTGCTGCCAATGAATTGAGTCATGTTCGTGACGCCATTAAATGGGGTACCGATTATCTTCTCAAATGTTCTTCCCGACGCAATCGCTTATACGTGCAGGTGGGGGATCCAGAGGAGGATCACCATTGTTGGGTTAGACCAGAGAAAATGAAGACAAAGAGAACAGTTTTGCATATAGGTGATGGGACGCCAGGTACAGAGATTGCAGCTGAAACCGCAGCAGCTTTTGCCTCTTCTTCTATTGTTTTTAGGAGTGTCGATCGTGCTTATTCTCGCCGTCTCCTCAACAAGGCCAAACTGATGTTCAAAATGGCAAAAGAACAAAAGGGAACTTATGACGGAGAATGTCCCTTCTACTGCTCTTTTTCTGGCTACAATGATGAGTTGTTGTGGGCAGCAACATGGCTTTTTATTGCAACCAAGAAGCCTGTGTATTTGAAATACGTTCAAGAGGAAGCCATCAGTGCTTATGTGAATGAGTTTAGTTGGGATCTCAAATACGCTGGAGCTCAAGTTCTTCTCACTAGGTTACTTTATGAAGGAGTACCGAAATTGGAAACATTCAAATATCAAGCCGATAGTTTCATATGCTCCGTCCATCCTGAGAGTCCCTACAATCAGATTAAATTAACTCCAGGTGGCGTGATTCACTTGAGGGATGGAGCCAACACGCAATATGTGACCGGCACGGCAATGATATTCATCTTCTACGGCGATATTCTGGAAGAACACAAACAAACTGTCACTTGTGGAACTAAAAAATTCACCTCAACTGACCTTTTCAGATTCGCCAAAAGCCAAATGGATTACATTCTGGGGAAGAACCCAGAGGGAAGATCTATAATGGTAGGGTATGGAAACAACCCACCACAGCAAGCACACCACAGAGGAGCGTCGGTGCCGATGTCGTCGGCGAACGAGGAGGTGTCATGTCCGGAGAGCTTCGCCAAATGGTTACAACGCGAAGGACCAAACCCTAACGAACTCACCGGAGCCATTCTTGGAGGACCCGACAAAAACGATCACTTCGACGACAAACGTACCGATTCCTCAGCCACTGAGCCATGCACCTACGTCAACTCTCTCGCCGTGGGCCCCCTCGCCAAGCTCGCATCTATCCATAATAAATAA 1467 0.4622 MVIRRESLAIILIWLAVFDGCSNLVHVVNGEFNYKEALTKSLIFLEAQRSGKLPPNKRVPWRGDSALDDGKLANVDLSGGYYDAGDNVKYGFPLAFTVTTLSWAAVYFKDEIRAANELSHVRDAIKWGTDYLLKCSSRRNRLYVQVGDPEEDHHCWVRPEKMKTKRTVLHIGDGTPGTEIAAETAAAFASSSIVFRSVDRAYSRRLLNKAKLMFKMAKEQKGTYDGECPFYCSFSGYNDELLWAATWLFIATKKPVYLKYVQEEAISAYVNEFSWDLKYAGAQVLLTRLLYEGVPKLETFKYQADSFICSVHPESPYNQIKLTPGGVIHLRDGANTQYVTGTAMIFIFYGDILEEHKQTVTCGTKKFTSTDLFRFAKSQMDYILGKNPEGRSIMVGYGNNPPQQAHHRGASVPMSSANEEVSCPESFAKWLQREGPNPNELTGAILGGPDKNDHFDDKRTDSSATEPCTYVNSLAVGPLAKLASIHNK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1901 488 SUPERFAMILY Six-hairpin glycosidases 32 486 IPR008928 GO:0005975
Acco10g1901 488 PANTHER ENDO-1,4-BETA-GLUCANASE 24 484 - -
Acco10g1901 488 FunFam Endoglucanase 30 487 - -
Acco10g1901 488 Gene3D - 28 488 IPR012341 GO:0005975
Acco10g1901 488 Pfam Glycosyl hydrolase family 9 34 477 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1901 Acco-ChrAcco10 31876649 31878885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1901 5 484 Glycoside Hydrolase AT3G43860 68.399 0.0 678
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1901 10 31876649 31878885 Acco10g1901 10 31876649 31878885 ECH