Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1835 ATGGTTGGAGCCTTGGAGGGTCAAAGGTTTCTTCCACTCAATCCTGCAAGAAACCTAATGGCCGACGAAGCACAGTATTCATCGGGCACAGATACCACGTCTCACAAGCGCAAGTATGAAGAGCCGTCGCTCACTCAATCAACTCACAGGCCCACTGGTTTCTCTGCGCCTATCGTGTCTACATCTCCCGATGGTGCTCATGCCCCGCCTACCTCCTATAACAGCGTTCCGCCACCGGCGGCAACTGGTATCGAGCTTGCCAAGCAGCGAGCTCAGGAGGTTGCTGCTCGCCTCTTAAACAGCAGTGGAGCATCTGGTTTGGATGCCAAGCGTTCCAAGGTTGAGAACGGCGCTTCAGGATTTGATTCCATCGATGCAAAGCCCCAGTACTCAGTCCCATCAGCTGCTCCCATTTCTTATGCCTATCAAGGTACTAGCAAAAAGATAGACATTCCGAATGGAAGGGTCGGCGTTATTATCGGTAAAGGTGGCGAGACAATCAAGTATCTTCAAACGCAGTCTGGAGCGAAGATCCAAGTTACACGTGATATGGACGCAGACCCAAATTCTCCAACAAGGACAGTGGAACTTATGGGAACTCCTGATCAAATTGCTGCTGCTGAAAAGTTTATTAGTGAAGTTCTTGCCGAGGCTGAATCTGGAGGTTCTGGTATTGTTGCTAGGCGACTGACGGGACAAGCTGGGTCTGACCAATTTGTGATGAAAATTCCTAATAATAAAGTTGGACTTGTGATTGGAAAAGGAGGAGAAACAATAAAGAACATGCAAGCTCAGACTGGAGCAAGAATTCAGGTGATACCATTGCATCTTCCCCCAGGTGACACGTCGACAGAAAGAACATTACAAATTGATGGAACCAGTGAACAAATTGAGTCCGCTAAACAGTTGGTTAATCATGTCATTAGTGAGAATCGTCTTAGAAATCCATCAATGTCTGGTGGTTATCCTCAACAAGGTTACCAAGCCCGACCACCTACTAGCTGGGGTGCTCCTGGTGCTCCTATGCAACAACCTGGTTATGGCTATGTGCAACCTGGAGCATACTCTGGCCCATCACCCCAATATAATATGCCTCAGCCACCATATCCAGGATATCCTACGCAGTCGTCTGGTGGATATTCCTCTAATTGGGATCAGTCCTCTGCACCACCTCAACAGTCAACTCAGGGCGGGGGTTATGATTACTATGGTCAACAGCAACAGCAAAATGCTGGGGGTCCGGCCCCTGCAGCTGATGGGACTGCTTATAGCTATGGTCAGCCACCTTCCTCTGGTTATAACCATCCTGGCCAGGGTTATCCTCAGGACAGTTATGGTGGGTATAGTGCACCGCCACAGTCAGGGTATGGGCAGGCACCTACATATGATCAGCAGCAAGGCTATGGCTCAGCCTCCAACTATGGTAGTGGCAGCAACCCAACACAGGAGGGCCACGCTCCCAACTATGGGGCTCAAGGAGACTCAACCCAGCCTCCTCCAGCTGTCCCTACTTCAATGTCCCAGCAAGCTTATGGTACTAACCAGCAGCCAAGCCCGAACCCAGCCACCTATCCTGCTCAAGGAACTGGCCAGCCAGGTTATGGGATGCCTCCAACTTCTCAAGCAGCTTACGGCAGTCAACCCCCAGCACAGTCTGGCTATGGATCTGGTTACGGGCCCCCTCCACCTCAAAAGCCTAGTGGTACTCCTGTTTATGGGCAGTCCACCCAGTCACCTAGTGCGGCAGGAGGCTATGGCCAATCTGGCCCAGGGCAACCAGGGTATCCTCCTGCTCAGCCCCCTTCTGGCTATGCTCAATCAGACTCTGCTCCCCCAAGAGCCCCACCGCCATATGGTTCTGCAGGGCAACCAGGTTATGGTCCCCCGCCATATGGTGCTCCTCCTGGTGGTCAGGGTTATGGTCAGGCACCTCCATCATACAACAGCGGTTCTTATGGTGCTGGTTACACTCAACCTCCAGTGTATTCTTCTGATGGGACACCGGCTCCAGCTGCCCAACAAGGCGGTGTGGCGAAAGCATCACCTCAAAGTTGA 2055 0.5182 MVGALEGQRFLPLNPARNLMADEAQYSSGTDTTSHKRKYEEPSLTQSTHRPTGFSAPIVSTSPDGAHAPPTSYNSVPPPAATGIELAKQRAQEVAARLLNSSGASGLDAKRSKVENGASGFDSIDAKPQYSVPSAAPISYAYQGTSKKIDIPNGRVGVIIGKGGETIKYLQTQSGAKIQVTRDMDADPNSPTRTVELMGTPDQIAAAEKFISEVLAEAESGGSGIVARRLTGQAGSDQFVMKIPNNKVGLVIGKGGETIKNMQAQTGARIQVIPLHLPPGDTSTERTLQIDGTSEQIESAKQLVNHVISENRLRNPSMSGGYPQQGYQARPPTSWGAPGAPMQQPGYGYVQPGAYSGPSPQYNMPQPPYPGYPTQSSGGYSSNWDQSSAPPQQSTQGGGYDYYGQQQQQNAGGPAPAADGTAYSYGQPPSSGYNHPGQGYPQDSYGGYSAPPQSGYGQAPTYDQQQGYGSASNYGSGSNPTQEGHAPNYGAQGDSTQPPPAVPTSMSQQAYGTNQQPSPNPATYPAQGTGQPGYGMPPTSQAAYGSQPPAQSGYGSGYGPPPPQKPSGTPVYGQSTQSPSAAGGYGQSGPGQPGYPPAQPPSGYAQSDSAPPRAPPPYGSAGQPGYGPPPYGAPPGGQGYGQAPPSYNSGSYGAGYTQPPVYSSDGTPAPAAQQGGVAKASPQS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1835 684 CDD KH-I 147 211 - -
Acco10g1835 684 ProSiteProfiles Type-1 KH domain profile. 144 211 - -
Acco10g1835 684 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 136 464 - -
Acco10g1835 684 Pfam KH domain 148 213 IPR004088 GO:0003723
Acco10g1835 684 Pfam KH domain 240 305 IPR004088 GO:0003723
Acco10g1835 684 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 142 221 IPR036612 GO:0003723
Acco10g1835 684 MobiDBLite consensus disorder prediction 610 635 - -
Acco10g1835 684 MobiDBLite consensus disorder prediction 312 331 - -
Acco10g1835 684 Gene3D K Homology domain, type 1 140 231 IPR036612 GO:0003723
Acco10g1835 684 Gene3D K Homology domain, type 1 232 332 IPR036612 GO:0003723
Acco10g1835 684 MobiDBLite consensus disorder prediction 642 670 - -
Acco10g1835 684 MobiDBLite consensus disorder prediction 424 438 - -
Acco10g1835 684 SMART kh_6 235 309 IPR004087 GO:0003676
Acco10g1835 684 SMART kh_6 143 216 IPR004087 GO:0003676
Acco10g1835 684 MobiDBLite consensus disorder prediction 373 414 - -
Acco10g1835 684 MobiDBLite consensus disorder prediction 26 71 - -
Acco10g1835 684 MobiDBLite consensus disorder prediction 447 553 - -
Acco10g1835 684 FunFam KH domain-containing protein 231 331 - -
Acco10g1835 684 ProSiteProfiles Type-1 KH domain profile. 236 304 - -
Acco10g1835 684 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 236 314 IPR036612 GO:0003723
Acco10g1835 684 MobiDBLite consensus disorder prediction 45 69 - -
Acco10g1835 684 MobiDBLite consensus disorder prediction 312 684 - -
Acco10g1835 684 MobiDBLite consensus disorder prediction 569 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1835 Acco-ChrAcco10 31348117 31356362 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1835 10 31348117 31356362 Acco10g1835 10 31348117 31356362 ECH