Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1805 ATGTCATGGCTGGGTCGCTCCCTCGCTAACTCCCTCCGACTCGGCCACGATGACGCCGTCGGCGATGACGATGATGAATGCGACGTCGTACCCTGTCAGCCCCACGACCCTCCTCCCACCTCACCTAAAAATTACGAAACCCCTTACCTGCAACAACATCAACCGCCAGACAACGAGTTTGGATTTGAAAATGAAGTGCTTTCTCGAGGAGTACAAGAGGATCTTGACGTATTCAAGCAAACTCTCACCCGTCAATTCTGGGGAATGGCATCCTTCTTAGCTCCTCCCCCGCGAGACTCCCACCCTTCCTTTCCCTCTCATCGCCACACCCAATCCTTTCCCGCTGCATCCGCTCGTAATCGATCAGATCCCTCCGATCGCTGTATTTCTCAAAATCTCGAAGAATCAGAGGCCCGACAGTTTCGGAGAGTCTTTTCGCACATTGAAGAAGCAAGTTTCCACCGGGACGCCACTGAAACTTTGGATATGAATCCAATTTCAATTTCGTTTGGATCCCAGTCTCTGCGTAACGAGGAAAACGCAAAGGAGGAGCATGGTTTTGAACGCGCGGTTGGAATTACAGATGAGGTGTTGGCCTTCGCGAGTAATATCGCGATGCATCCTGAGACGTGGTTGGACTACCCTGTCGAGGAAGAAGATGACACGGAGGATTTTGACATGTCCGATGCCCAAAAAGAGCACGCTTTGGCCATTGAAAGACTCGATCATCGATTGGCTGCGCTCAGAATTGAGCTGTGCCCTTGCCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACAAGATGCTGAGGTTTTATCCACACCTCAGGTTTTGGCTGCGAGAGCACTGTGGATGGAGGAGTTACAGAAGCAAGAGAAACTTGAATCTGAATGTTTTGGAAGGAGCACTTCCTACTCAAGAGACACAGCTCCGCATGAAAACTTTTCTCCCAGATCTTTCGATGATTCCTATTATGGTGTCATGCCTCATGGAACATACAGATTTGAGGAAGATTATGAGAGTGAGAAGCACATGGGTGAAAGCTCTGAAGCACATTTCATTGATAAGGTAGTCATAGAGGAAAACTCCAAAACTAAAACTGAGGACAAGGACCTATCAAGGGTTCGATCCTCGAAATTTGTTATCGAGGACTATGAAGATGATGAGTATGAGTGGCCAGAGGACGATATTGATGGAATTACTGTGCCGGTGGTAAATGAAGAAGACATATCTTTCAGTGATCTTGAGGATGATAATTTTTTGTTAAGACCTTTTAAGTCCAAAACAGAATCAAATGCTCCATGA 1335 0.4652 MSWLGRSLANSLRLGHDDAVGDDDDECDVVPCQPHDPPPTSPKNYETPYLQQHQPPDNEFGFENEVLSRGVQEDLDVFKQTLTRQFWGMASFLAPPPRDSHPSFPSHRHTQSFPAASARNRSDPSDRCISQNLEESEARQFRRVFSHIEEASFHRDATETLDMNPISISFGSQSLRNEENAKEEHGFERAVGITDEVLAFASNIAMHPETWLDYPVEEEDDTEDFDMSDAQKEHALAIERLDHRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDAEVLSTPQVLAARALWMEELQKQEKLESECFGRSTSYSRDTAPHENFSPRSFDDSYYGVMPHGTYRFEEDYESEKHMGESSEAHFIDKVVIEENSKTKTEDKDLSRVRSSKFVIEDYEDDEYEWPEDDIDGITVPVVNEEDISFSDLEDDNFLLRPFKSKTESNAP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1805 444 ProSiteProfiles BSD domain profile. 222 274 IPR005607 -
Acco10g1805 444 SMART wurzfinal6 222 274 IPR005607 -
Acco10g1805 444 SUPERFAMILY BSD domain-like 192 279 IPR035925 -
Acco10g1805 444 Pfam BSD domain 222 278 IPR005607 -
Acco10g1805 444 MobiDBLite consensus disorder prediction 106 127 - -
Acco10g1805 444 MobiDBLite consensus disorder prediction 93 127 - -
Acco10g1805 444 MobiDBLite consensus disorder prediction 17 44 - -
Acco10g1805 444 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 430 - -
Acco10g1805 444 Gene3D BSD domain 184 284 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1805 Acco-ChrAcco10 31103655 31105772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1805 192 272 EF-hand Containing Proteins AT1G69030 29.032 6.19e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1805 10 31103655 31105772 Acco10g1805 10 31103655 31105772 ECH