Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1743 ATGTCAGCAAGACGCACATCAGATCATCTCAAAATTATCAGTATCTGGTTTTGGAAGGATACTTTCAACGTAAAAGTAAAAAATGAAGCCCACCTCCTCTTCCTCTTCTTCACAGCTGCTCTTTTGATCTTCTTCCTCTTTCTCGAAAAGCATCGCAGCAAAATGGGTTTGTCTAGATCATCGGGGGCCATGATACTGCTGGTGTTCTTGGTCTTCACCGTGTCTTCGGCCTTGGACATGTCCATAATCTCCTACGATCGAACCCACCCCGATCACTCTACCTGGAGGACGGATTCCGAGGTTATGGCAATATACGAACACTGGCTTGAAAAACATGGCAAGGCCTACAATGCTCTGGGCGAAAAGGAGAAGAGGTTCGAGATTTTCAAGGATAATCTCAGGTTCATCGATGAGCACAACGCTGGGAATCGGACCTACAAAGTCGGGTTGAACCGATTCGCTGATCTTACCAATGAGGAGTACAGGGCCAAGTACCTGGGAACCAAGATCGACCCCAAGAGGAGGATTGCCAAGACCAGGAGCAACCGTTACGCCTCACAGGTCGGCGACAAATTGCCGGAATATGTTGATTGGCGGAAGGAAGGTGCGGTCGTCCAAGTCAAAGATCAAGGAAGTTGCGGGAGTTGCTGGGCATTCTCAACCGTAGCTGCAGTGGAAGGAATAAATAAATTAGTTATAGGCGATCTAATTTCACTATCTGAGCAAGAACTGGTGGATTGTGATACAAAATATAATGAAGGGTGCAATGGGGGATTAATGGACTACGCCTTTCAGTTCATCATCGACAATGGTGGCATTGACACTGAAGAGGATTATCCTTACCATGCTGTCGATGGCCAGTGTGACCATAATAGGAAAAATGCAAAAGTTGTGACAATTGACGGCTATGAAGATGTTCCTGCCAATGATGAGAAAGCATTGAAAAAAGCTGTTGCAAATCAACCAGTGAGCGTTGCTATTGAAGCAGGCGGCAGGGAATTTCAATTATATGTATCTGGTGTATTTACAGGAAGATGTGGTACAGCACTAGATCATGGTGTTACGGCTGTTGGTTATGGCACAGAAAATCGCGTGGATTACTGGATTGTGAAGAACTCCTGGGGATCGAGCTGGGGAGAGGAAGGGTACATTAGAATGGAGCGTAATGTTGGAACAACCAATACAGGAAAGTGTGGCATTGCGGTGGAGGCCTCCTATCCTACAAAGAAAGGCCTTAATCCCCCAAAGCCTGAACCATCTCCTCCTTCACCGGTGAAGCCGCCCACTGTTTGTGATAATTACTACAGCTGTCCGGAGAGCACTACTTGCTGCTGCGTCTATGAGTATGGGAAGTATTGCTTTGCCTGGGGATGCTGTCCTCTTGAGGCTGCCACCTGCTGTGATGACCACTACAGTTGCTGCCCTCACGACTATCCCATCTGTAACCTTGACGCTGGCACCTGTCTTATGAGTGAGACCACCCCATTTGGAGTGAAGGCAATGATGCGTTTTCCAGCTAAACCCCATTTTTCATTTGGAGTGGCGCCAGTGGAATGA 1557 0.4733 MSARRTSDHLKIISIWFWKDTFNVKVKNEAHLLFLFFTAALLIFFLFLEKHRSKMGLSRSSGAMILLVFLVFTVSSALDMSIISYDRTHPDHSTWRTDSEVMAIYEHWLEKHGKAYNALGEKEKRFEIFKDNLRFIDEHNAGNRTYKVGLNRFADLTNEEYRAKYLGTKIDPKRRIAKTRSNRYASQVGDKLPEYVDWRKEGAVVQVKDQGSCGSCWAFSTVAAVEGINKLVIGDLISLSEQELVDCDTKYNEGCNGGLMDYAFQFIIDNGGIDTEEDYPYHAVDGQCDHNRKNAKVVTIDGYEDVPANDEKALKKAVANQPVSVAIEAGGREFQLYVSGVFTGRCGTALDHGVTAVGYGTENRVDYWIVKNSWGSSWGEEGYIRMERNVGTTNTGKCGIAVEASYPTKKGLNPPKPEPSPPSPVKPPTVCDNYYSCPESTTCCCVYEYGKYCFAWGCCPLEAATCCDDHYSCCPHDYPICNLDAGTCLMSETTPFGVKAMMRFPAKPHFSFGVAPVE 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1743 518 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 97 402 IPR013128 GO:0008234
Acco10g1743 518 SMART pept_c1 192 408 IPR000668 GO:0006508|GO:0008234
Acco10g1743 518 FunFam Cysteine protease 1 81 410 - -
Acco10g1743 518 Gene3D Cysteine proteinases 85 410 - -
Acco10g1743 518 SUPERFAMILY Cysteine proteinases 96 408 IPR038765 -
Acco10g1743 518 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 367 386 IPR025661 -
Acco10g1743 518 Gene3D Granulin 428 490 IPR037277 -
Acco10g1743 518 PRINTS Papain cysteine protease (C1) family signature 352 362 IPR000668 GO:0006508|GO:0008234
Acco10g1743 518 PRINTS Papain cysteine protease (C1) family signature 367 373 IPR000668 GO:0006508|GO:0008234
Acco10g1743 518 PRINTS Papain cysteine protease (C1) family signature 210 225 IPR000668 GO:0006508|GO:0008234
Acco10g1743 518 SUPERFAMILY Granulin repeat 428 462 - -
Acco10g1743 518 SMART Inhibitor_I29_2 105 161 IPR013201 -
Acco10g1743 518 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 350 360 IPR025660 -
Acco10g1743 518 FunFam Cysteine protease 1 428 491 - -
Acco10g1743 518 CDD Peptidase_C1A 193 407 IPR039417 -
Acco10g1743 518 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 210 221 IPR000169 -
Acco10g1743 518 Pfam Granulin 442 489 IPR000118 -
Acco10g1743 518 SMART GRAN_2 431 488 IPR000118 -
Acco10g1743 518 Pfam Cathepsin propeptide inhibitor domain (I29) 105 161 IPR013201 -
Acco10g1743 518 Pfam Papain family cysteine protease 192 408 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1743 Acco-ChrAcco10 30647859 30651597 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1958 05 35949411 35952245 Acco10g1743 10 30647859 30651597 CCT
Acco10g1743 10 30647859 30651597 Acco10g1743 10 30647859 30651597 ECH