Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1587 ATGAGGGTCACTTCCATTTTGCTCAGTCTGGTTCTGCTTTTCCCTCTTCTCTCTTTCTCTTATTCCACCAATACCTCTGAACTGTTTGAAAGCTGGTGCAAGCAGCATGGCAAAACCTACTCTTCCGAAGAGGAGAAACTATACAGGTTCAAAGTATTCGAGGACAATTATGACTTTGTTTCCAACCACAATCAAACGGGCAGTTCCAGTTATACACTCTCCCTCAATGCCTTCGCTGATCTCACCAGCCACGAATTTAGGGCCTCTCGTTTAGGTTTATCTCCTGCTCTGCTTCGATTCGACCATCGAACGCTTCAGCAGTCCGATGACATTTCCATTGAGAGTCTTCCTTCTGAGGTTGATTGGAGAAAGCAAGGGGCCGTAACTCAGGTCAAGGACCAAGGAAGTTGTGGTGCTTGTTGGTCATTCTCGGCGACAGGAGCTATTGAAGGTATAAATAAGATTGTTACAGGCTCTCTTGTCAACCTCTCTGAACAAGAATTGGTAGATTGTGATAGAACCTATAACACTGGTTGTGAGGGTGGACTCATGGATTATGCTTTTCAGTTTGTCATTGATAACAATGGGATCGACACAGAGGAAGATTACCCATACCGAGGTCGTGAAGGGTCTTGTATCAAGGATAAGTTAAATAGACGTGTTGTTACCATTGATGGTTATACTGATGTGCCTCCGAATGATGAGAAGCAGCTACAAAAGGCTGTTGCAACCCAGCCTGTTAGTGTTGGCATATGTGGGAGCGATAGAGCTTTCCAGTTATACTCAAAGGGTATTTTCAACGGCCCATGTTCAACTTCTTTGGATCATGCGGTGCTGATTGTAGGATATGGTTCAGAAAATGGGGAGGATTACTGGATTGTGAAGAATTCATGGGGAACTAGTTGGGGAATGAATGGTTACATGCACATGCGGCGCAACACCGGCAACTCCCAAGGGTTATGTGGAATCAACAGTTTAGCATCATATCCAACCAAGTCCAGCCCTAATCCTCCTGCTCCATCTCCTCCAGCTCCTATTAAATGTAATTTCTTCACTTATTGTGAACAAGGAGAGACCTGTTGCTGTGCAAGACGCATTTTCGGTATATGCTTTTCATGGAAATGTTGTGGCTTATCATCTGCCGTCTGCTGCAAGGACAATCGCCATTGCTGCCCCAATGACCATCCTGTATGTGACATCAGAAGGGGTCAATGTCTTAAGAGAAATGCAAATATGACGAGAACAAAGGCTAACGAGATCGAGGGCCCTTTCCATAAGCCGAAGGGTTGGAATTCTCAGTGA 1302 0.4501 MRVTSILLSLVLLFPLLSFSYSTNTSELFESWCKQHGKTYSSEEEKLYRFKVFEDNYDFVSNHNQTGSSSYTLSLNAFADLTSHEFRASRLGLSPALLRFDHRTLQQSDDISIESLPSEVDWRKQGAVTQVKDQGSCGACWSFSATGAIEGINKIVTGSLVNLSEQELVDCDRTYNTGCEGGLMDYAFQFVIDNNGIDTEEDYPYRGREGSCIKDKLNRRVVTIDGYTDVPPNDEKQLQKAVATQPVSVGICGSDRAFQLYSKGIFNGPCSTSLDHAVLIVGYGSENGEDYWIVKNSWGTSWGMNGYMHMRRNTGNSQGLCGINSLASYPTKSSPNPPAPSPPAPIKCNFFTYCEQGETCCCARRIFGICFSWKCCGLSSAVCCKDNRHCCPNDHPVCDIRRGQCLKRNANMTRTKANEIEGPFHKPKGWNSQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1587 433 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 291 310 IPR025661 -
Acco10g1587 433 Pfam Cathepsin propeptide inhibitor domain (I29) 29 86 IPR013201 -
Acco10g1587 433 Pfam Granulin 359 406 IPR000118 -
Acco10g1587 433 SMART GRAN_2 348 405 IPR000118 -
Acco10g1587 433 CDD Peptidase_C1A 117 330 IPR039417 -
Acco10g1587 433 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 274 284 IPR025660 -
Acco10g1587 433 Gene3D Granulin 345 419 IPR037277 -
Acco10g1587 433 FunFam Cysteine protease 1 345 408 - -
Acco10g1587 433 Pfam Papain family cysteine protease 116 330 IPR000668 GO:0006508|GO:0008234
Acco10g1587 433 FunFam cysteine protease XCP2 11 333 - -
Acco10g1587 433 PRINTS Papain cysteine protease (C1) family signature 291 297 IPR000668 GO:0006508|GO:0008234
Acco10g1587 433 PRINTS Papain cysteine protease (C1) family signature 276 286 IPR000668 GO:0006508|GO:0008234
Acco10g1587 433 PRINTS Papain cysteine protease (C1) family signature 134 149 IPR000668 GO:0006508|GO:0008234
Acco10g1587 433 SMART Inhibitor_I29_2 29 86 IPR013201 -
Acco10g1587 433 SUPERFAMILY Cysteine proteinases 22 331 IPR038765 -
Acco10g1587 433 SMART pept_c1 116 331 IPR000668 GO:0006508|GO:0008234
Acco10g1587 433 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 134 145 IPR000169 -
Acco10g1587 433 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 325 IPR013128 GO:0008234
Acco10g1587 433 SUPERFAMILY Granulin repeat 345 378 - -
Acco10g1587 433 Gene3D Cysteine proteinases 17 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1587 Acco-ChrAcco10 29441784 29444490 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1587 10 29441784 29444490 Acco10g1587 10 29441784 29444490 ECH