Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1583 ATGTTGATCCCACACAGTACCTGCTTCTCTTGCGTTATTCCGATGGGCCGCCTTTCGCTTCTGGCTTTCTTGCTCTTCTCCCTTCTATCGGCGGCCGTGGCAACGGTGGAGGGCATCGATGATGAAGATGACGTTCTGATTCGGCAAGTGGTACCGGACAACGACGATCACTTGCTTAACGCCGAACACCATTTCTCCACCTTCAAGACCAAGTTCGGCAAGACCTACGCTACTAGAGAGGAGCACAACTATCGTTTCGGTGTCTTCAAAGCAAACTTGCGCCGGGCTAGGCTGCACCAGAAACTTGATCCCTCCGCCGCCCACGGCGTCACTAAATTCTCCGATCTTACTCCATCAGAATTTCGCCGGCAGTACCTCGGCCTCCGGCGGCTTCGTCTGCCCGCTGATGCTCATAAGGCTCCGATCCTCCCTACTATCGATCTCCCGACGGACTTCGATTGGCGAGATCATGGAGCAGTCACTGAGGTCAAGGACCAGGGAGCTTGTGGATCATGCTGGGCATTTAGTACCACAGGGGCGTTGGAGGGAGCTCATTTTCTGGAGACTGGCGAGCTTGTAAGCCTTAGCGAGCAACAGCTAGTGGACTGTGACCATGAGTGTGATCCAGAAGAGGCTGGAGCATGTGACGCAGGCTGCAACGGTGGGCTGATGAACTCTGCATTTGAATACACCCTGAAGGCCGGTGGGTTGGAGCGAGAAAAGGACTATCCTTACACTGGAACTGATCGCGGTACCTGCAAATTTGACAAAAGCAAAATTGCTGCTTCCGTGGCTAATTTCTCTGTGGTTTCCATAGACGAAGATCAAATTGCTGCAAATCTGGTCAAGCATGGCCCTCTTGCAGTTGGCATAAATGCAATTTTTATGCAGACATACATTGGTGGCGTTTCATGCCCATATGTATGCGGAAAGCATTTGGATCACGGGGTTCTTCTGGTGGGCTATGGTTCTGCTGGTTATGCCCCCATCCGCTTTAAGGAAAAACCCTACTGGGTCATCAAGAATTCGTGGGGAGAGAACTGGGGAAATAATGGGTATTATAAGATCTGCAGGGGTCGTAACGTGTGTGGAGTGGATTCCATGGTCTCGAGCGTGGCTGCTGTGGGTACTTCGCACTCATCTTAA 1146 0.5192 MLIPHSTCFSCVIPMGRLSLLAFLLFSLLSAAVATVEGIDDEDDVLIRQVVPDNDDHLLNAEHHFSTFKTKFGKTYATREEHNYRFGVFKANLRRARLHQKLDPSAAHGVTKFSDLTPSEFRRQYLGLRRLRLPADAHKAPILPTIDLPTDFDWRDHGAVTEVKDQGACGSCWAFSTTGALEGAHFLETGELVSLSEQQLVDCDHECDPEEAGACDAGCNGGLMNSAFEYTLKAGGLEREKDYPYTGTDRGTCKFDKSKIAASVANFSVVSIDEDQIAANLVKHGPLAVGINAIFMQTYIGGVSCPYVCGKHLDHGVLLVGYGSAGYAPIRFKEKPYWVIKNSWGENWGNNGYYKICRGRNVCGVDSMVSSVAAVGTSHSS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1583 381 SUPERFAMILY Cysteine proteinases 62 372 IPR038765 -
Acco10g1583 381 CDD Peptidase_C1A 149 372 IPR039417 -
Acco10g1583 381 SMART pept_c1 148 373 IPR000668 GO:0006508|GO:0008234
Acco10g1583 381 SMART Inhibitor_I29_2 65 121 IPR013201 -
Acco10g1583 381 Gene3D Cysteine proteinases 40 373 - -
Acco10g1583 381 PRINTS Papain cysteine protease (C1) family signature 337 343 IPR000668 GO:0006508|GO:0008234
Acco10g1583 381 PRINTS Papain cysteine protease (C1) family signature 315 325 IPR000668 GO:0006508|GO:0008234
Acco10g1583 381 PRINTS Papain cysteine protease (C1) family signature 166 181 IPR000668 GO:0006508|GO:0008234
Acco10g1583 381 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 166 177 IPR000169 -
Acco10g1583 381 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 61 366 IPR013128 GO:0008234
Acco10g1583 381 FunFam Cysteine protease RD19A 45 373 - -
Acco10g1583 381 Pfam Cathepsin propeptide inhibitor domain (I29) 65 121 IPR013201 -
Acco10g1583 381 Pfam Papain family cysteine protease 148 371 IPR000668 GO:0006508|GO:0008234
Acco10g1583 381 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 313 323 IPR025660 -
Acco10g1583 381 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 337 356 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1583 Acco-ChrAcco10 29397419 29399451 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1583 10 29397419 29399451 Acco10g1583 10 29397419 29399451 ECH