LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco10g1576	ATGTCTGTAATTCGTCATCGGTGGTCGAGTTCAATCTCCAGGATGGCGGAAGAGATCAAGACTGCTGACCTAGGATCCTCTGCTACTACTTCTGCAAAAACCAGACGCTTCTGGCCTTCTATTCTTCGTTGGATTCCCACTTCCACCCAGCACATAATCGATTCCGAGAAGCGTCTTCTTTCCGTTGTCAAGACACCTTATGTTCAAGAATTGGTTAATATAGGCTCTGGTCCACCTGGGTCGAAAGTTAGATGGTTTCGTTCGTCAAGCAATGAGCCAAGGTTTATCAATACTGTAACATTTGAGAGCGCACAAAATTCTCCTACGCTCGTAATGGTTCATGGATATGCCGCTTCGCAGGGCTTCTTTTTCCGTAATTTTGATGCGCTCGCCAGTCGTTTCAGGGTCATTGCTGTCGATCAACTTGGTTGGGGTGGATCAAGCAGGCCTGACTTTACATGCAAAAGCACAGAAGAAACTGAGGCATGGTTTATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAATCTAACCAATTTTATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTTCTAAGTATGCCATTAAGCACCCTGAGCACGTACAGCACTTGATTTTGGTGGGACCTGCTGGATTTTCATCAGAATCAGAGGCCAAATCTGAGTGGCTTACAAAGTTTAGAGCAACATGGAAAGGAGCAGTATTGAACCATCTTTGGGAATCTAATTTTACACCTCAAAAACTTGTAAGAGGATTAGGTCCTTGGGGTCCTGATATAGTCCGCAGGTATACAAGTGCTCGGTTTGGTACACATTCAACTGGTGAAGCATTGACTGAAGAGGAATCAAGATTGCTATCAGATTATGTTTACCATACCTTAGCGGCGAAATCTAGTGGAGATCTGTGCTTAAAATATATATTTTCTTTTGGAGCCTTTGCTAGGATGCCCCTTCTTCACAGCGCCTCAGAGTGGAAGGTGCCAACCACATTCATATACGGTTTCCAGGATTGGATGAGTTATACTGGGGCCCAAGAAGCTCGTAAGCATATGAAGGTTCCATGTGAAATCATCAGGGTTCCTCAGGCGGGGCACTTTGTGTTCATTGATAAACCCACGGACTTTCATTCAGCAGTGATTTATGCTTGTAGAAGGTTTCTTTCACCTGATCCACAAACTGAATCCCTTCCTGAAGGCCTGACCTCTGCATAG	1215	0.442	MSVIRHRWSSSISRMAEEIKTADLGSSATTSAKTRRFWPSILRWIPTSTQHIIDSEKRLLSVVKTPYVQELVNIGSGPPGSKVRWFRSSSNEPRFINTVTFESAQNSPTLVMVHGYAASQGFFFRNFDALASRFRVIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLTNFILLGHSFGGYVASKYAIKHPEHVQHLILVGPAGFSSESEAKSEWLTKFRATWKGAVLNHLWESNFTPQKLVRGLGPWGPDIVRRYTSARFGTHSTGEALTEEESRLLSDYVYHTLAAKSSGDLCLKYIFSFGAFARMPLLHSASEWKVPTTFIYGFQDWMSYTGAQEARKHMKVPCEIIRVPQAGHFVFIDKPTDFHSAVIYACRRFLSPDPQTESLPEGLTSA	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco10g1576	404	Pfam	alpha/beta hydrolase fold	108	373	IPR000073	-
	Acco10g1576	404	PRINTS	Alpha/beta hydrolase fold signature	133	148	IPR000073	-
	Acco10g1576	404	PRINTS	Alpha/beta hydrolase fold signature	196	209	IPR000073	-
	Acco10g1576	404	PRINTS	Alpha/beta hydrolase fold signature	182	195	IPR000073	-
	Acco10g1576	404	PRINTS	Epoxide hydrolase signature	182	195	IPR000639	GO:0003824
	Acco10g1576	404	PRINTS	Epoxide hydrolase signature	133	148	IPR000639	GO:0003824
	Acco10g1576	404	PRINTS	Epoxide hydrolase signature	361	383	IPR000639	GO:0003824
	Acco10g1576	404	PRINTS	Epoxide hydrolase signature	328	344	IPR000639	GO:0003824
	Acco10g1576	404	PRINTS	Epoxide hydrolase signature	196	209	IPR000639	GO:0003824
	Acco10g1576	404	SUPERFAMILY	alpha/beta-Hydrolases	99	380	IPR029058	-
	Acco10g1576	404	FunFam	Probable 1-acylglycerol-3-phosphate O-acyltransferase	94	384	-	-
	Acco10g1576	404	Gene3D	alpha/beta hydrolase	94	384	IPR029058	-
	Acco10g1576	404	PANTHER	RE40534P-RELATED	36	382	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco10g1576	88	215	Acyl Lipid Metabolism Gene Families	AT1G64670	33.577	3.07e-12	66.2

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Acco10g1576	10	29326433	29330639	Acco10g1576	10	29326433	29330639	ECH