Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1571 ATGTCTGCGGTCGAAGCGGGGAAGAATGTCGAAGAAGAGAAGGAGGTGGTGAGAAGGGGAGAGCTCTTGTTTTGCGGTGGTACGTGTTGGGATATTATTGGTCGTCGTAAAGGTTCAGCTGACGGCAACCTGTTATCTCCAACTCGGCTTCGCCCTCTTGTTGGGATTGATATTCGTTTCGTTGCATCTGGATGCGCATCTTGTCATTGCGTGGCATTAGATGTTGACGGCCGCTGCTATACTTGGGGACGCAATGAGAAGGGGCAACTGGGTCATGGAGATACCATTCAGCGTGACAGGCCAACCGTGGTATCTGAACTTTCAAAACATAAAATTGTCAAAGCTGGAGCAGGGAGGAGCCACACCGTGGTTGTTACAGAGGATGGCCACTCCCTTGCCTTTGGATGGAATAAGCATGGGCAGCTAGGTTCAGGTTCTGCAAAAAATGAAATTGAATCATCTCCTGTTCGCTGTCTTGTGTCAGAAGTCAGTTATGCAACTTGTGGTGGTGACTTCACTGCGTGGTTATCTTCTGTTGAAGGAGCTTCTATACTTACTGCAGGGCTACCACAATTTGGACAGCTAGGACATGGAACAGACAATGAGTATAATTCCAAAGACAGTTCTGTGAGGTTGGTTTATGAAGCCCAACCACGTCCACGGGCAGTTGCTAAGCTATCTGGTGAAACAATTGTCAAAGTGGCATGTGGAACAAATCATACAGTGGCGGTGGATAAGAATGGCTTTGTTTACACGTGGGGTTTTGGTGGTTACGGAAGGCTAGGGCATAGGGAGCAGAAGGATGAGTGGTCCCCACGTCGTGTGGATGCTTTTCGGGACAGAAATGTTCTGCCTCCTGATGCTGTGATTTCAGCTGGTTCTGTTAACTCTGCATGCACTGCAGGTGGAGGGCAATTGTATATGTGGGGCAAAATAAAGAATACTGGTGATGATTGGATGTATCCTAAGCCTCTGCTGGATTTAAGTGGCTGGAACTTACGATGCATGGATTCAGGCAATATGCACCATTTTGTTGGGGCTGATTCTTCATGTATAAGTTGGGGCCATGCTCAACATGGAGAACTGGGATATGGACCTAATGCACAGAAGTCTTCAGCAGCACCCAAAAAGGTGGACATTCTTGAGGGCATGCATGTTATGGGTGTTGCTTGTGGTATGGGCCATTCCATGGTAATTGTTGATGGAACAAATGTTGGTGAACGACTTTATCAGCTTGATATATACGATGGGAAAGCTTCTGGTGAAGTAAATGAGGAACCTGTAAAGAAAGCTCCCGCGCCCAAGCAGAGTACCAAAAAGGGTGCAAAAGGTGGTGACAACTCCAAGAAGAAGAAAACAAAAGAATCATCTGAATCGGAGGAGGAAGAGTATGATGGAGCAAGTAACGATGAGGAGCTAGAAAATGGCGTGGCCAGGGGGAAAAGGAAACGCGGCGGAAATAATTCCGGTAGAGCAAAAGGCAAAGCTAAAGGTTCTGGCGCTGGGAGAAATCGATCTCCAGTAAAAACGGGCAAGAGAGGAAGACCCCGTAAGTCTTCTTGA 1563 0.4741 MSAVEAGKNVEEEKEVVRRGELLFCGGTCWDIIGRRKGSADGNLLSPTRLRPLVGIDIRFVASGCASCHCVALDVDGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKHKIVKAGAGRSHTVVVTEDGHSLAFGWNKHGQLGSGSAKNEIESSPVRCLVSEVSYATCGGDFTAWLSSVEGASILTAGLPQFGQLGHGTDNEYNSKDSSVRLVYEAQPRPRAVAKLSGETIVKVACGTNHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWSPRRVDAFRDRNVLPPDAVISAGSVNSACTAGGGQLYMWGKIKNTGDDWMYPKPLLDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQHGELGYGPNAQKSSAAPKKVDILEGMHVMGVACGMGHSMVIVDGTNVGERLYQLDIYDGKASGEVNEEPVKKAPAPKQSTKKGAKGGDNSKKKKTKESSESEEEEYDGASNDEELENGVARGKRKRGGNNSGRAKGKAKGSGAGRNRSPVKTGKRGRPRKSS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1571 520 SUPERFAMILY RCC1/BLIP-II 18 402 IPR009091 -
Acco10g1571 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 77 128 IPR000408 -
Acco10g1571 520 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 115 125 IPR000408 -
Acco10g1571 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 248 303 IPR000408 -
Acco10g1571 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 129 179 IPR000408 -
Acco10g1571 520 MobiDBLite consensus disorder prediction 423 520 - -
Acco10g1571 520 MobiDBLite consensus disorder prediction 442 459 - -
Acco10g1571 520 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 389 399 IPR000408 -
Acco10g1571 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 349 402 IPR000408 -
Acco10g1571 520 Gene3D - 210 407 IPR009091 -
Acco10g1571 520 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 234 244 IPR000408 -
Acco10g1571 520 Pfam Regulator of chromosome condensation (RCC1) repeat 185 244 IPR000408 -
Acco10g1571 520 Pfam Regulator of chromosome condensation (RCC1) repeat 247 285 IPR000408 -
Acco10g1571 520 Pfam Regulator of chromosome condensation (RCC1) repeat 76 125 IPR000408 -
Acco10g1571 520 Pfam Regulator of chromosome condensation (RCC1) repeat 128 174 IPR000408 -
Acco10g1571 520 Pfam Regulator of chromosome condensation (RCC1) repeat 353 399 IPR000408 -
Acco10g1571 520 Gene3D - 7 209 IPR009091 -
Acco10g1571 520 PRINTS Chromosome condensation regulator RCC1 signature 78 94 IPR000408 -
Acco10g1571 520 PRINTS Chromosome condensation regulator RCC1 signature 112 125 IPR000408 -
Acco10g1571 520 PRINTS Chromosome condensation regulator RCC1 signature 131 147 IPR000408 -
Acco10g1571 520 PRINTS Chromosome condensation regulator RCC1 signature 250 264 IPR000408 -
Acco10g1571 520 PRINTS Chromosome condensation regulator RCC1 signature 234 250 IPR000408 -
Acco10g1571 520 PANTHER PROTEIN RCC2 10 501 IPR028641 -
Acco10g1571 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 247 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1571 Acco-ChrAcco10 29299912 29306007 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1571 10 29299912 29306007 Acco10g1571 10 29299912 29306007 ECH