Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1310 ATGCAACACGGAGACTACAATTCAGCTCCTTATTATCAATTTCCTCAGATGCAGAACCCAATTCACAATCCTAATCCTAACCCTAACCCTATCCCTCCCGATTCAGTCCCAAATCAGTATGCCTCCGCTCCTCCTTTCACCTCCGATTACTCGCCTTACGCCTCTACTTATCCTCCATACCCTCAAAATCCCGATCCTATTCCAGTCGCTCCCACTGCCCCCTCATACCCGCCAACCTCCAACCCCAATTTGAACTCTTTCAGTTCTCCCCCCCAACCTTCCTCTTTTCCTCCGTTTGAGTCCCATGTTCCATATCAACAACCTCCACAACAACCATGTCAATATCCCCCGTATGATCAACATCAGACGACTCCAAGTTATGCTCCTTCTTCCTCCGCAATCCCTCCTAACCCCACTCCCAGTTCTTTAACCGCGTCCTTCTATCCGGCTTCGTACTCTCATCCTGGATCATCCATTCCCCCTACATACGAAAGTCCGTACGAGAATTCCGCGAAATTTGATTATGGTGGGGCTTATGTCGATGACAAGTATGGAAGTTTTAATCGGAGCCGGTCTGATTTGGGGTCGGATTTGTATGGAAAGCGACCTGACACTAGGCATGATACTGTTCGTGATGATATTTATGGAGATGGCGTGTATGCCTATAGAGGGGGCGAAACGGAACCATATGGAGCACGGGGAACTGCTCCTAAGTCTTCAACTTGGTCCGGCTTTGATGATTATGGAAGGTCAATTAGTCTTCCCTCTGCGAAGGAACCCTCTTTTTCAAACAAGGTTATGAAAGCTGTGCCTAAGGTTGATGCCCAAGAGGATGTTAAAAGCGGGGTGCAAAAATTTCGTGTGAAGCTATTGGCAGAAAGTGGTGGTCAGAGCACTATGGATGTGCTCTGTCAGATTGGTTTGGATGTGATTCGTATGCTGGATCCAAGTACCAGCCGGATGTTGAGAATTTATCCTCTTGAGAACATCACGAGATGTGACAAATTCGATTCGACTACCCTTGCATTTTGGTCCAAGAGTCCAGTTGACATTGAGCCAAGACGAATCAGATTGCAATCCAATAGTTACACCACTAACACTCTCTTGGATACAGTTACTGCTGCAATCATACAGTTCAAGGAAATGGGTGGAAGCAGGAGGCCTGTTGAACCACTGAAAACAAATGAACAACCTACGGAGAAGAAGAAAGGCCTTGTTGATTGGGTGAATCTGATCAAACCTGCCAATGAGGAGAAAGATCATTGGGTCCCGGATGAAGCAGTTTCAAAATGCACTGCTTGTGGGACTGATTTTGGGGCTTTTGTTCGCAAGCACCACTGTAGGAACTGTGGGGATATTTTCTGTGACAAATGCACGCATGGTAGAATTGCTCTAACTGCAGATGAAAATGCTCAGCCAGTACGAGTTTGTGATCGATGCATGGCTGAAGTGACACAGAGGCTCAGCAATGCGAAAGAGGCTGCAAACAAGCCTGCATTGCAAAGTCATGAGGATCTTGCCAGGAAACTGCGGGAGGAGCTGGATAGGAACCGGAGGACATCAGGTTCCAAGTCCGATGGATCTGGAAGACGGATGAAAGAAGTTGAATGCCCCACTTGTACAGTCCATCTGCAGGTCCAAGTACCTAGCTCGGGTTCAGAGACCATTGAGTGTGGGGTTTGCCAGCACCCATTTCTTGTGAGTGCTCATTGA 1713 0.4752 MQHGDYNSAPYYQFPQMQNPIHNPNPNPNPIPPDSVPNQYASAPPFTSDYSPYASTYPPYPQNPDPIPVAPTAPSYPPTSNPNLNSFSSPPQPSSFPPFESHVPYQQPPQQPCQYPPYDQHQTTPSYAPSSSAIPPNPTPSSLTASFYPASYSHPGSSIPPTYESPYENSAKFDYGGAYVDDKYGSFNRSRSDLGSDLYGKRPDTRHDTVRDDIYGDGVYAYRGGETEPYGARGTAPKSSTWSGFDDYGRSISLPSAKEPSFSNKVMKAVPKVDAQEDVKSGVQKFRVKLLAESGGQSTMDVLCQIGLDVIRMLDPSTSRMLRIYPLENITRCDKFDSTTLAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAAIIQFKEMGGSRRPVEPLKTNEQPTEKKKGLVDWVNLIKPANEEKDHWVPDEAVSKCTACGTDFGAFVRKHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVTQRLSNAKEAANKPALQSHEDLARKLREELDRNRRTSGSKSDGSGRRMKEVECPTCTVHLQVQVPSSGSETIECGVCQHPFLVSAH 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1310 570 MobiDBLite consensus disorder prediction 512 531 - -
Acco10g1310 570 MobiDBLite consensus disorder prediction 57 78 - -
Acco10g1310 570 MobiDBLite consensus disorder prediction 1 20 - -
Acco10g1310 570 SMART fyve_4 417 486 IPR000306 GO:0046872
Acco10g1310 570 MobiDBLite consensus disorder prediction 91 115 - -
Acco10g1310 570 MobiDBLite consensus disorder prediction 21 39 - -
Acco10g1310 570 MobiDBLite consensus disorder prediction 1 142 - -
Acco10g1310 570 MobiDBLite consensus disorder prediction 116 130 - -
Acco10g1310 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 412 490 IPR013083 -
Acco10g1310 570 Pfam FYVE zinc finger 421 485 IPR000306 GO:0046872
Acco10g1310 570 FunFam Zinc finger, FYVE-type, endofin 412 490 - -
Acco10g1310 570 Coils Coil 500 520 - -
Acco10g1310 570 PANTHER PROTEIN FREE1 1 570 IPR045893 GO:0036258|GO:0043130
Acco10g1310 570 MobiDBLite consensus disorder prediction 40 56 - -
Acco10g1310 570 PRINTS Proline rich extensin signature 129 154 - -
Acco10g1310 570 PRINTS Proline rich extensin signature 93 109 - -
Acco10g1310 570 PRINTS Proline rich extensin signature 66 87 - -
Acco10g1310 570 PRINTS Proline rich extensin signature 18 30 - -
Acco10g1310 570 PRINTS Proline rich extensin signature 52 64 - -
Acco10g1310 570 SUPERFAMILY FYVE/PHD zinc finger 420 491 IPR011011 -
Acco10g1310 570 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 425 485 IPR017455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1310 Acco-ChrAcco10 26959571 26964535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1310 413 499 EF-hand Containing Proteins AT3G14270 33.673 8.14e-13 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1310 10 26959571 26964535 Acco10g1310 10 26959571 26964535 ECH