Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1302 ATGAAGCAGCTAACACTATTGTTATTGTTTCTACTAACGCTTCACTTATCTGTATCAGGAGTTGCTTCTACGACATTTACCATGGTTAATAAATGTAGCTATACAGTTTGGCCGGGCATTCTTTCAAACGCCGGAGTTGCTCCTCTTCCCTTCACCGGTTTTGTTCTTCAAACAGGAGAGTCAAAGACCATCTCCGCACCTACTTCTTGGGGCGGCCGTTTCTGGGGTCGAACTCAATGCGCCCAAGACTCCACCGGTAAGTTTGCGTGTCTCACCGGTGACTGTGGCTCCGGGAAGGTGGAATGTGGAGGAAATGGGGCCTCACCGCCGGCCACCTTGGCGGAATTTACTCTAGACGGATCGGGAGGGCTTGATTTCTTCGATGTGAGCTTGGTAGACGGATACAACGTACCTATGATGGTCGTTCCACAAGGTGGTTCCGGTGACAACTGCACGAGCACGGGATGTGTGGCAGACCTGAACGGCGCGTGTCCTTCGGAGCTAAAAGTGATGAGCGGGGACGGAAGGGAAGGGGTAGCGTGCAAGAGCGCGTGCGAAGCCTTTGGGTCCCCGCAGTATTGTTGTAGCGGCGCGTATGGGAATCCGAACACATGCAAACCATCGTCATACTCGCAGATATTCAAGAACGCGTGTCCACGCGCCTACAGTTACGCCTACGACGACAAAACGAGCACGTTCACATGTGCGTCTGCCGATTATACCATCTCCTTTTGCCCATCACCAAACACGAGCCAGAAGGCGTCGAACAGCCCATCTGCTCCGGCTGCTCCGAGCTTGCCGACGGTGGACACAAACAGCCCCATGGTGTACCAAGGTGCTGCTTTTGATGAAAGCTTGCTCTCAGCCGCCACGTGCATCCACGTGTTCCAATCTCAGATCATCGCCGGCATCTTCACTGTAGCTGTGGCCCTTTGGGGATTCTGA 945 0.5365 MKQLTLLLLFLLTLHLSVSGVASTTFTMVNKCSYTVWPGILSNAGVAPLPFTGFVLQTGESKTISAPTSWGGRFWGRTQCAQDSTGKFACLTGDCGSGKVECGGNGASPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMMVVPQGGSGDNCTSTGCVADLNGACPSELKVMSGDGREGVACKSACEAFGSPQYCCSGAYGNPNTCKPSSYSQIFKNACPRAYSYAYDDKTSTFTCASADYTISFCPSPNTSQKASNSPSAPAAPSLPTVDTNSPMVYQGAAFDESLLSAATCIHVFQSQIIAGIFTVAVALWGF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1302 314 PANTHER OS03G0233200 PROTEIN 10 246 IPR001938 -
Acco10g1302 314 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Acco10g1302 314 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Acco10g1302 314 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Acco10g1302 314 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Acco10g1302 314 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Acco10g1302 314 SMART tha2 26 246 IPR001938 -
Acco10g1302 314 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Acco10g1302 314 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Acco10g1302 314 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Acco10g1302 314 Pfam Thaumatin family 30 246 IPR001938 -
Acco10g1302 314 CDD TLP-PA 25 245 - -
Acco10g1302 314 Gene3D Thaumatin 24 246 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1302 Acco-ChrAcco10 26881122 26882697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1302 4 247 Receptor kinase-like Gene Family AT5G38280 55.870 7.73e-97 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1302 10 26881122 26882697 Acco10g1302 10 26881122 26882697 ECH