Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1094 ATGATGGTGATGAACACTGTGTTATCAGTAATGGCTTATGATTATCCCTCTGAGAAGCTCAGTGTGTATCTCTCCGACGACGCTGCCTCAGAGATAACCTTCTACGCTTTACGTGAAGCTTCTTCTTTCGCTAATCATTGGCTTCCCTTCTGTAAAAGATTCAACGTTGAACCCAGGTCCCCTTCTGCTTATTTTAACTCTTTGTCGTCCTTCTCGACTTCTTCAAATGATTCTGTTTGGACCAAAGAGTTGGCACATATTAAGAAACTGTATCAAGATATGGAAAGGCGAATCGAAGATGCGACCAAGTCGGGAAAAGTACCCAGAGATGTACGTTCAAAGCGCAAGGCATTTTCTCAGTGGGATACCTTTTCGTCTCGACGTGACCATGATATACTGGAACCACTTTCCCTCCTTTCCTTTGGAAAGATCATATTCGAGCACTGGTTAGACCTAATTGACAGATGGTAG 471 0.4331 MMVMNTVLSVMAYDYPSEKLSVYLSDDAASEITFYALREASSFANHWLPFCKRFNVEPRSPSAYFNSLSSFSTSSNDSVWTKELAHIKKLYQDMERRIEDATKSGKVPRDVRSKRKAFSQWDTFSSRRDHDILEPLSLLSFGKIIFEHWLDLIDRW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1094 156 Coils Coil 84 104 - -
Acco10g1094 156 Pfam Cellulose synthase 2 130 IPR005150 GO:0016020|GO:0016760|GO:0030244
Acco10g1094 156 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1094 Acco-ChrAcco10 24913871 24914797 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1094 1 130 Glycosyltransferase AT1G55850 51.908 5.15e-40 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1094 10 24913871 24914797 Acco10g1094 10 24913871 24914797 ECH