Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1086 ATGTCATTAGTGTATCATCTCTCTCTTTCTCTCTCTTTGAATTTTCTTCCTTATTCCTTTTATATATTGCCATTTCGCACTCTTCTCTTTTTCCTTCACCGGAAAAGCTTTTTCTCCTCAGGATTGATGTCGGAAAAGGGTCGACCACTACCAAAATTTGGTGAATGGGATGTCAATGATCCTGCCTCAGCTGAAGGATTCACCGTGATCTTTAACAAAGCCAGGGATGAGAAAAAGACAGGTGGCAAACCTGAGTCACCTGGAAAGGCTGATCCTCAAAGCAGGCCTGCAGTAGAACCTGCCAAACCTCAGACTGATGGAGGTGAGATGGTGAGTGTCAAAATCCAGAAGAAAAGAAAAGCAGAAAAAATGGTTCTGCTGCATGCAACCTCCTGCAGAGTCATAGCAATGGTTGCCCCGGTTACTGAGTTGCAGTTTGGGGGTGTGCAAAGAAGACAGACTATTATTATTTGTATCTATGTGTATTAA 489 0.4294 MSLVYHLSLSLSLNFLPYSFYILPFRTLLFFLHRKSFFSSGLMSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGKADPQSRPAVEPAKPQTDGGEMVSVKIQKKRKAEKMVLLHATSCRVIAMVAPVTELQFGGVQRRQTIIICIYVY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1086 162 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 45 80 IPR008700 -
Acco10g1086 162 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 43 93 IPR040387 -
Acco10g1086 162 MobiDBLite consensus disorder prediction 75 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1086 Acco-ChrAcco10 24824890 24827937 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1086 10 24824890 24827937 Acco10g1086 10 24824890 24827937 ECH