Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1009 ATGAGTGCAGTTCCGAAAGAGTCAATTGAAGTCATTGCGCAGAGCATTGGCATCACCAATTTGTCCCCTGATGTCGCTCTCGCTCTCGCTCCGGACGTGGAGTATAGGGTTCGCGAAATTATGCAGGAGTCTATAAAATGCATGCGCCACTCAAGGCGAACCGTTCTTACGTCTGATGATGTGGATAGTGCTCTTCAATTGAGAAACCTGGAGCCAGTATATGGTTTCACCTCTAATGATCCTGTGCGGTTCAAAAGGGCTGCTGGACACAAGGATTTGTTCTACATTGATGACAAAGATGTTGATTTTAAGGATGTGATTGAAGCACCACTGCCAAAAGCACCTCTTGATACATCAGTTACTACTCATTGGCTGGCAATTGAAGGTGTACAGCCTGCAATTCCTGAAAATGCTCCCATTGAAGCTCCCTCTGAAACAAGAAAATCTGACTATAAGGAAGATGTTCTTCCTATTGATAAATTACCAGTTAGACATGTAATTTCAAGAGAGCTACAGCTTTACTACAGCAAGATAACTGAGCTGATATCAAACAGGCCAAGCACCATTCTCTTTAATAGAGCATTATTTAGCTTGGCAACAGATTCAGGGCTCCATCCTTTGATTCCTTATTTCTCATACTTTGTTGATGATGAGGTGGCTCGAAATTTAAATAATTTAAATCTCTTATTTGCTATGATGCGTCTTGTTCGGAGCCTTGCGCAAAATCCTCACATACACATAGAGCCTTATTTACATCAACTGATGCCGGCTATTATGACCTGCCTTGTTTCAAAAAGGCTAGGGAATAGGCAATCTGATAATCACTGGGAACTCAGGAACTTCAGTGCAAACCTGCTTGCTTCAATATGTAAAAGATTTGGGCATGTTTATCATAACCTTCTACCACGTGTGACAAAGACATTGCTTCATGCTTTCTTGGACCCTACAAAATCTCTACCTCAACATTATGGTGCAATTAAAGCAATAGCAGCTCTTGGATCCAACATGGTTCGCTTGCTTATTCTTCCAAATCTTGAGGCATATCTGCTTCTTCTTGAGTCAGAAATGCAACTTGAGAAGCAAAAAAACGTATTAAAAAGGCATGAAGCATGGCAAGTTTATGGAGCATTGCTGTGCGCAGCAGGCCAATGTATTCATGAAAGGGTCAAAGTGTACAGCCGTATGCTCACTCCTGCTTCTACACGTGCTTTTTCAAGAGGCTGTGGGAAAGTCGATACAGTATTGCGAAGCAAACGTAAAGCTAGCACAGACAATCTAATGCAGCAACCTCCATTGAAGAAAATTGCAACAGATGTTTCTGGGGGTTTGATGCCAATGAACTCCTTGCCGGTTGATATGCAAGGCACACCGAGTGGATTTTCCAATTCTATGGGAGTTCCTAACGCCAGCATATCCTCTATGACTCGCCAGTTAAACCAAGGAAGAGAAGTCGGAGGTCAACAAAGTAAGGTATCAGCAACACTCGCTCAGGCGTGGAAGGATTACATCGATGCCGGACATTTGTTATCATCTGTGCATGAACTATTCGGCCATAGTGTATTTTCCTTTATTCCAAAAGCTGAAGCATCCATATTCTTGTGA 1602 0.4245 MSAVPKESIEVIAQSIGITNLSPDVALALAPDVEYRVREIMQESIKCMRHSRRTVLTSDDVDSALQLRNLEPVYGFTSNDPVRFKRAAGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSVTTHWLAIEGVQPAIPENAPIEAPSETRKSDYKEDVLPIDKLPVRHVISRELQLYYSKITELISNRPSTILFNRALFSLATDSGLHPLIPYFSYFVDDEVARNLNNLNLLFAMMRLVRSLAQNPHIHIEPYLHQLMPAIMTCLVSKRLGNRQSDNHWELRNFSANLLASICKRFGHVYHNLLPRVTKTLLHAFLDPTKSLPQHYGAIKAIAALGSNMVRLLILPNLEAYLLLLESEMQLEKQKNVLKRHEAWQVYGALLCAAGQCIHERVKVYSRMLTPASTRAFSRGCGKVDTVLRSKRKASTDNLMQQPPLKKIATDVSGGLMPMNSLPVDMQGTPSGFSNSMGVPNASISSMTRQLNQGREVGGQQSKVSATLAQAWKDYIDAGHLLSSVHELFGHSVFSFIPKAEASIFL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1009 533 Gene3D - 164 368 IPR046344 GO:0006367
Acco10g1009 533 SMART TAF_cls 2 68 IPR004823 -
Acco10g1009 533 FunFam Transcription initiation factor TFIID subunit 6 164 360 - -
Acco10g1009 533 SUPERFAMILY ARM repeat 184 378 IPR016024 -
Acco10g1009 533 FunFam transcription initiation factor TFIID subunit 6 1 66 - -
Acco10g1009 533 SUPERFAMILY Histone-fold 2 66 IPR009072 GO:0046982
Acco10g1009 533 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 2 530 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Acco10g1009 533 Pfam TAF6 C-terminal HEAT repeat domain 258 345 IPR011442 GO:0006367
Acco10g1009 533 CDD TAF6C 164 380 IPR011442 GO:0006367
Acco10g1009 533 Gene3D Histone, subunit A 1 67 IPR009072 GO:0046982
Acco10g1009 533 Pfam TATA box binding protein associated factor (TAF) 1 65 IPR004823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1009 Acco-ChrAcco10 23972231 23976839 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1009 10 23972231 23976839 Acco10g1009 10 23972231 23976839 ECH