Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0994 ATGCTTCCGCAGCGGGTGAAGAAGACCATAACTGATAATCCAAAGAAGCTGGCCAACTTAATCGACCTTGTAAATCTTCCCTCGGCTGTTCGAGAGTTTGTGGGTCAATCTCAAACTTCTCGGTTTGGCTGTTTTTTGCGGGTTTGGTCCTACATCAAAACCAATAATCTCCAGGATGCAACCAATAAGAATGTTGTGAACTGTGATGAGAAGTTGAGAAGTATTCTGTTGGGAAGATCTCATGTCGAGTTGGCAGAACTTCCTGAACTAATCAAACTGCATTTTCCAAAAGCGCTTAAGTGA 303 0.429 MLPQRVKKTITDNPKKLANLIDLVNLPSAVREFVGQSQTSRFGCFLRVWSYIKTNNLQDATNKNVVNCDEKLRSILLGRSHVELAELPELIKLHFPKALK 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0994 100 CDD SWIB-MDM2_like 31 95 - -
Acco10g0994 100 ProSiteProfiles SWIB/MDM2 domain profile. 19 97 IPR003121 -
Acco10g0994 100 Pfam SWIB/MDM2 domain 24 95 IPR003121 -
Acco10g0994 100 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 11 97 - -
Acco10g0994 100 Gene3D SWIB/MDM2 domain 18 100 IPR036885 -
Acco10g0994 100 SUPERFAMILY SWIB/MDM2 domain 13 97 IPR036885 -
Acco10g0994 100 SMART swib_2 20 100 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0994 Acco-ChrAcco10 23869648 23870896 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Acco10g0994 SWIB 1.5e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g0994 10 23869648 23870896 Acco10g0994 10 23869648 23870896 ECH