Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0943 ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGGCCTTCTAAGGCCTTTCTCGCTCACCGCTCTGCCGAATCTCCGGCTCCCCCTCAGCCCGACCTCCGCCGCAGCCTCCGCCGACGGAATGTGAGGTACAACATGGAGTATGATGACTACCTCGACGAGGACGACGAGGATGAGGACGAGGATGAGAGGAGGAGGGAGAAGAAGCTCAAGCTAGTTGTGAAGCTGAACCAGGATAGGGATAGGGATGAAGACGAGTCGGCGCCCAGCCGCACGCGCGGTGTGGCGCGTGGTAGTCACTCGCGGGATTCTTCCGATGAGGACGAGGGCGAGGGGAAGCCCCTGAAGAAGAGAAGGATTGGCGGCGGCGGCAGGGTCGGAAATGAAGACGGCGAGGAGGAGGAGGAGGAAGAAGGAGGTGAGGATAATGATGAAGAAAACGAAAATGAAGAAGATGAGAATGTTCGAGACCATAATGATGACGATGATGACGGGGTAAAAGGCCGAAAAGGGGATTCGAAAGGGCTCCACACTGTTTCAGGTATGTGTGACTTATGGGTTCAGGTTGTGATTCGTAGGTCTATAGTTTTGATGCTGACCAGTGCAGGTTCTATTTGTATAGTCATTTTAGAGTTTTTTGAACTTACGCCTTTCCCGTTTTTATCAGGGACTCCAAGAAAATCTTCATCTGGAATTCCGTTACCTGATAAGAGGACATTAGAGTTGATCCTCGACAAACTTCAAAAGAAGGATACATATAATGTGTATGCGGAACCTGTTGATCCTGAAGAGCTTCCTGATTATCATGATGTGATTGAGCATCCAATGGATTTCGCCACAGTGCGAAAGAAGCTAGCTAATGGATCATATCCTACGTTGGAACAATTTGAGAGTGATGTATTTCTAATTTGCACAAATGCAATGCAATACAATTCGGCAGACACTATATACCACAAACAGGCACGATCTATACAAGAATTAGCACGGAAGAAGTTTGAGAAGTTAAGGGTTGACTTTGAACACTCACAAAGTGAGCTGAAATCAGACCAAAAAGCAAGGTCAAATTCCTTGGGCAAGAAGCAGACAAAGAAGCCAGTTGGTCTTGCCTCACAGGAACCTGTTGGTTCTGATTTCTCAGCAGGCGCAACTCTTGCTAACATTGGAGATGTACTGCCAACTTCCCACCCTATCCCAGGTGGCACCTGTGAGAGGCCTTGCAACAATGATGGGCTTCCCGATGTTAATGGTTTCTTTATTGATGCAAATCAAGAGAAAGCAGAAGATTTTTTATCAGGGAAGAGCCTGCTCTCTAAGTTGGGACGAAAGCCGTTTGCTCTTGATGATAATCGTCGGGGAACTTATAGTGCTTCTATTCAACCAGTTACCAAATCAGATTCTGTTCTTATGACATTTGAGAGTGAAATTAAGCAGCTGGTTACCGTTGGTCTTCATGCTGAAAATTCCTATTCCAGGAGTTTAGCTCGTTTTGCTGCGACTTTAGGGCCTGTAGCTTGGAAAATTGCTTCCCGGAGAATTCAGCAGGCACTTCCAAGTGGGTGTAAATTTGGTCGTGGTTGGGTGGGAGAGTATGAACCACTTCCAACACCAGTAATAATGCTTGATAATCGAACCCATAGAGAACCTAGCTTTGTTTCAAAGTTTCAGTCTACTGAATCTGGAAAGGGTGACAAAAATGGCAAGACCTCGGAATCCTCCATGGATAACAATGTGCATGGACTCATGTTAGAGGGGAAACAGCCTTCGATTGATCCTGCTAATAGACCCGCCTCAGAAGGGAAACCATCTCTGTTTGGCTCTGCTGGAATAAGACCCAATGCTCCAGTCAATGTCCTTTATCAACAACAGAATGCTCAACCCAGGAGTTCTGGCAAGCCTGAGAATAAGGGTCTGAAACAGGTGGAGTTAAACTCTTTGCCCTCTAGTAATCAGAATAATGCCAATCTTGGAGCAAAATTTTTAAGTAATGCTCCTCCTGGAGTGTCTAAGCCTAGAGAAATGGCGCCTAGGAACATGAATATATTGCCACCTGCACCTTTCAAAGAGCCTGATGCTAATGGAGTTGCAAGCGGAGATTTACCTAATGGAAAAGTCACAAATTCTATTATGAATAGACGGGCAACTGGGCCACCCTCTGAAAGCACATCAAATCAAACTGTTAGAGCTGGTCCTTTTGTGCCACATGGGCAAGATCAGAGTCTTACCGATCCAGTTCAGCTGATGAGGATGTTAGCTGAGAAGGCTCAGAAGCAACAAGCTTCTTCTAATCCTTCTCCCGTTGATACTCCTCCTATGACACCATCTGTTTCATCAGGACGGAGGGACGACTCGGGCAATGCTTCAGCAGCAGCAGCCCGCGCATGGATGTCTGTGGGAGCAGGAGGATTTAAGCAAGGAACTGATAATTCTAGTTCACCCAAAAACCAGATATCTGCAGATTCTTTATACAACCCATCAAGAGAGTTTCATCAGCATATTCCTCGAACGAGGGGGGAGATCCCTTCTGGCGGAATGCCTTTCCAGCCCGAGAAGACCAACTTCCCATTTCAGGCACTGGTGTCTCAACCGATTCACCCAGGCAGTGTTGCGCAGTTTCCAAACCGGCCAATGGTTTTCCCTCAGTTAGCAGCTGCTGATCTATCCAGATTTCAAATGCAGCCTGCTTGGCAAGGTCCCAATCCCCATAGCCAACCAAGGCAAAAACCAGAAACGCTGCCTCCCGACTTGAATATCGGCTTCCAATCTCCAGGGTCACCTGCAAAACAATCTTCCAGTGTGATGGTTGACTCACAGCAACCAGACCTAGCTCTACAACTATGA 2838 0.4715 MGQIVRRKKKGRPSKAFLAHRSAESPAPPQPDLRRSLRRRNVRYNMEYDDYLDEDDEDEDEDERRREKKLKLVVKLNQDRDRDEDESAPSRTRGVARGSHSRDSSDEDEGEGKPLKKRRIGGGGRVGNEDGEEEEEEEGGEDNDEENENEEDENVRDHNDDDDDGVKGRKGDSKGLHTVSGMCDLWVQVVIRRSIVLMLTSAGSICIVILEFFELTPFPFLSGTPRKSSSGIPLPDKRTLELILDKLQKKDTYNVYAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYPTLEQFESDVFLICTNAMQYNSADTIYHKQARSIQELARKKFEKLRVDFEHSQSELKSDQKARSNSLGKKQTKKPVGLASQEPVGSDFSAGATLANIGDVLPTSHPIPGGTCERPCNNDGLPDVNGFFIDANQEKAEDFLSGKSLLSKLGRKPFALDDNRRGTYSASIQPVTKSDSVLMTFESEIKQLVTVGLHAENSYSRSLARFAATLGPVAWKIASRRIQQALPSGCKFGRGWVGEYEPLPTPVIMLDNRTHREPSFVSKFQSTESGKGDKNGKTSESSMDNNVHGLMLEGKQPSIDPANRPASEGKPSLFGSAGIRPNAPVNVLYQQQNAQPRSSGKPENKGLKQVELNSLPSSNQNNANLGAKFLSNAPPGVSKPREMAPRNMNILPPAPFKEPDANGVASGDLPNGKVTNSIMNRRATGPPSESTSNQTVRAGPFVPHGQDQSLTDPVQLMRMLAEKAQKQQASSNPSPVDTPPMTPSVSSGRRDDSGNASAAAARAWMSVGAGGFKQGTDNSSSPKNQISADSLYNPSREFHQHIPRTRGEIPSGGMPFQPEKTNFPFQALVSQPIHPGSVAQFPNRPMVFPQLAAADLSRFQMQPAWQGPNPHSQPRQKPETLPPDLNIGFQSPGSPAKQSSSVMVDSQQPDLALQL 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0943 945 MobiDBLite consensus disorder prediction 754 783 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 343 374 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 160 174 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 921 945 - -
Acco10g0943 945 SMART bromo_6 229 337 IPR001487 GO:0005515
Acco10g0943 945 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 944 - -
Acco10g0943 945 CDD Bromodomain 236 332 - -
Acco10g0943 945 ProSiteProfiles Bromodomain profile. 248 318 IPR001487 GO:0005515
Acco10g0943 945 MobiDBLite consensus disorder prediction 892 945 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 550 609 - -
Acco10g0943 945 Coils Coil 34 54 - -
Acco10g0943 945 Gene3D - 235 356 IPR036427 GO:0005515
Acco10g0943 945 MobiDBLite consensus disorder prediction 699 729 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 62 128 - -
Acco10g0943 945 ProSitePatterns Bromodomain signature. 254 310 IPR018359 -
Acco10g0943 945 MobiDBLite consensus disorder prediction 802 819 - -
Acco10g0943 945 SUPERFAMILY Bromodomain 223 335 IPR036427 GO:0005515
Acco10g0943 945 MobiDBLite consensus disorder prediction 644 658 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 1 174 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 33 48 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 644 669 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 691 739 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 752 791 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 1 16 - -
Acco10g0943 945 MobiDBLite consensus disorder prediction 129 159 - -
Acco10g0943 945 PRINTS Bromodomain signature 299 318 IPR001487 GO:0005515
Acco10g0943 945 PRINTS Bromodomain signature 281 299 IPR001487 GO:0005515
Acco10g0943 945 PRINTS Bromodomain signature 265 281 IPR001487 GO:0005515
Acco10g0943 945 MobiDBLite consensus disorder prediction 800 819 - -
Acco10g0943 945 Pfam Bromodomain 242 322 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0943 Acco-ChrAcco10 23248914 23253964 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g0943 10 23248914 23253964 Acco10g0943 10 23248914 23253964 ECH