Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1949 ATGGCGGCAAGGGACAAGAACGACCACGCCGGAGAAGAAGAAGATAATTGTTACAGACAGACTTTGATGGCCGGTGTCGAGAGCTTTTTTGAGTCTCACGAGCCATTCCATTCAGTGCTTCTGAGTCAGGGAGCGACAGTGGGGGAGGCTTTGAATAAGGTCCTCCCTTTCAAGTCTATGGCGGGAGAAACATCATGGATCATTCACTACCTTGATAATGCAACCAGGGAGACGAGGGAGTTTGACTCATGTTTAGAACTTGGTGAGGAAAGTGATAAAGAAGTCACTGCTGTTTACGTGGATAGTATTTTGCCTGATGAACTTTTGGAACGTATCATAGCCTATCTTCCCATTGCAAGCATCTTCAGAGCTGGTTGTGTCTGTAAGAGATGGCACGAAATTGTTACCTCAAAGAGGTTTCTGTGGAATCTTTCACATGTGCTTCCACAGAAACCTTGGTACTTTATGTTTACAAGCTTTGATGAACCAACTGGTTATGCTTATGATCCCATCCTTAGGAAATGGTATAGCATTGAACTTCCCTGCATTGACACTTCTAATTGGTTCATTGCATCCTCGTGTGGTTTAGTTTGCTTCATGGACAACGACAATCAAAGTGAATTATTTGTGTGCAACCCCATTACTAAAATCTATAAGAAGCTTGAGGGCCCCCCTGATTCTGACTTTTCTGAGTACAGTGCATTGGCAATTTCAGTAAACAGAGCATCACAAAGTTACACAGTGGCTATTGTGAAATCAAAGGAAGTGCCTGAGAACTTCTCCCAATCTGTTATTTCAATTCAAATATACAATTCAGAAGATGAGACATGGGTCACCAGTTTAACAGAGGTTTTGATAGGGTGGAGAGGTGGTGATAAGAGTGTGATGTGTAATGGGGTGCTGTACTTTTTGGTTTATTCAACCGGGGCTGGCCATCCAGAGAATCGACACGCCCTTGTGGCTTATAACATCACTAACCATTCGTCTCAGCGATCTCTGGCAAAGAGCTTCATTCCAATATCTTGTCCTCTAACATGTGGTCGGCTGATGAATTTGAAGGAGAAGCTTGTAATGGTGGGAGGTCTTGGCAAACGCGACCGGCCTGACATTATAAAAGGGATCGGCATATGGGTGTTAAATAACGGGAAATGGGATGAAATTGCTCGTGTGCCTCACAAATTCTTTCAAGGGTTTGGAGAGTTGGACGATGTATTTGCAAGCAGTGGTACAGATGATCTGATATATATTCAAAGCTATGGAGCCTCAGCACTTCTCACGTATGACATGAACCATAATCATTGGAGATGGTCACAGAAGTGTCCTGTGACAAAAAGGTTTCCCCTGCATCTCTTCACTGGGTTTTGCTTTGAACCCAGGCTTGAAATTGCTCCTTAA 1395 0.4358 MAARDKNDHAGEEEDNCYRQTLMAGVESFFESHEPFHSVLLSQGATVGEALNKVLPFKSMAGETSWIIHYLDNATRETREFDSCLELGEESDKEVTAVYVDSILPDELLERIIAYLPIASIFRAGCVCKRWHEIVTSKRFLWNLSHVLPQKPWYFMFTSFDEPTGYAYDPILRKWYSIELPCIDTSNWFIASSCGLVCFMDNDNQSELFVCNPITKIYKKLEGPPDSDFSEYSALAISVNRASQSYTVAIVKSKEVPENFSQSVISIQIYNSEDETWVTSLTEVLIGWRGGDKSVMCNGVLYFLVYSTGAGHPENRHALVAYNITNHSSQRSLAKSFIPISCPLTCGRLMNLKEKLVMVGGLGKRDRPDIIKGIGIWVLNNGKWDEIARVPHKFFQGFGELDDVFASSGTDDLIYIQSYGASALLTYDMNHNHWRWSQKCPVTKRFPLHLFTGFCFEPRLEIAP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1949 464 NCBIfam F-box protein interaction domain 194 428 IPR017451 -
Acco09g1949 464 SUPERFAMILY F-box domain 102 204 IPR036047 GO:0005515
Acco09g1949 464 FunFam F-box/kelch-repeat protein At3g61590 family 150 448 - -
Acco09g1949 464 Pfam F-box-like 104 143 IPR001810 GO:0005515
Acco09g1949 464 CDD F-box_AtFBW1-like 102 140 - -
Acco09g1949 464 Gene3D - 100 144 - -
Acco09g1949 464 ProSiteProfiles F-box domain profile. 98 145 IPR001810 GO:0005515
Acco09g1949 464 PANTHER F-BOX FAMILY PROTEIN 84 461 IPR045048 -
Acco09g1949 464 SUPERFAMILY Galactose oxidase, central domain 266 443 IPR011043 -
Acco09g1949 464 FunFam F-box/kelch-repeat protein At3g61590 97 144 - -
Acco09g1949 464 SMART fbox_2 104 144 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1949 Acco-ChrAcco09 36420773 36426714 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1949 09 36420773 36426714 Acco09g1949 09 36420773 36426714 ECH