Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1556 ATGAACGGTGGCGATGAGGTCGTCGCAGCTCCAGCGGGTCCACCGCAGCCGCTGGAGTGGAAATTCTCGCAGGTTTTTGGTGAACGTACGGCCGGGGAGGAAGTTCAGGAAGTGGATATAATTTCTGCCATTGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTAGTTCTATTTGAGAGGACAGATACGAAAGATCATGGAGGATCAAGAAGGGATTTGGAAAGTGTGGATTATACAATAAGTAGGCATCCTGAGTTCCGATATAAAACCGAGTTTCAGAGTCATGAACCTGAGTTCGATTACCTAAAGAGCTTGGAAATTGAAGAAAAAATAAACAAAATCAGATGGTGCCAAACAGCTAATGGTGCCTTGTTTCTTCTATCTACTAATGATAAAACCATCAAATATTGGAAGGTTCAAGAAAAGAAAGTCAAGAAAATATCTGAGATGAATGTTGACCCATCAAAAGCAATAGCGAATGGCTGTATCAGCAGTATTGCTAGTTCAAGTAATTCGAGTAGCCCTAGGCCATATCTTGCCAATGGAGGATCTCCAGATAAATCATACAGCTATCTGACCAATGACTTATCCTTTCCGCCTGGGGGCATCCCATCGTTAAGATTACCTGTGGTAACCAGCCATGAGACGAGCCTTGCAGCTCGATGTCGTAGAGTATACGCCCATGCTCATGATTATCATATCAACTCTATATCAAGTAACAGTGATGGCGAAACTTTCATATCTGCTGATGATTTGCGGATAAATCTGTGGAACCTAGAAATTAGCAATCAAAGTTTCAATATTGTGGATGTAAAGCCTGCAAACATGGAGGATCTGACTGAGGTTATAACATCTGCCGAGTTTCACCCTACCCATTGTAATATGTTGGCCTATAGCAGTTCAAAGGGTTCAATTCGTCTTGTTGATCTGCGCCAATCAGCATTGTGTGATACTCATGCCAAATTGTTTGAGGAACAGGAGGCCCCAGGTTCCAGGTCATTTTTTACGGAGATTATTGCTTCAATTTCAGATATAAAATTCGGGAAGGATGGAAGATATGTTCTTAGTCGCGATTACATGACTCTTAAGTTGTGGGACATTAATATGGATTCTGGCCCAGTTGCGACTTTCCAGGTTCATGAATATCTAAGACCTAAGCTATGTGATTTATATGAAAATGATTCAATTTTTGACAAGTTCGAGTGTTGTTTGAGTGGCGATGGGTCGCGTGTAGCAACTGGGTCTTACAGCAACCTATTCCGTGTGTTTGGCTGCACCCCAGGAAGTGCTGAGGCTACAACCTTGGAAGCCAGTAAAAATCCAATGAGGCGACAAGTTCAGACCCCTGCAAGGCCAGCTAGATCACTGGGAAGTAGTTTAACTCGAGTTGTAAGGCGAGGAGCCGATAGTCCGGGTGTTGATGCGAATGGGAACTCTTTTGATTTCACTACAAAGTTGCTGCACTTAGCATGGCACCCAACCGAAAATTCGATTGCCTGTGCTGCTGCAAATAGTTTGTACATGTACTATGCATAA 1557 0.4322 MNGGDEVVAAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGGSRRDLESVDYTISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISEMNVDPSKAIANGCISSIASSSNSSSPRPYLANGGSPDKSYSYLTNDLSFPPGGIPSLRLPVVTSHETSLAARCRRVYAHAHDYHINSISSNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLVDLRQSALCDTHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYVLSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVATGSYSNLFRVFGCTPGSAEATTLEASKNPMRRQVQTPARPARSLGSSLTRVVRRGADSPGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1556 518 Pfam WD domain, G-beta repeat 229 265 IPR001680 GO:0005515
Acco09g1556 518 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 15 518 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 36 200 - -
Acco09g1556 518 PIRSF PPA2_B55 11 518 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 SUPERFAMILY WD40 repeat-like 39 510 IPR036322 GO:0005515
Acco09g1556 518 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 350 377 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 237 264 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 293 321 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 322 349 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 487 516 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 404 430 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 265 292 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 378 403 IPR000009 GO:0000159|GO:0019888
Acco09g1556 518 Gene3D - 84 516 IPR015943 GO:0005515
Acco09g1556 518 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 212 514 - -
Acco09g1556 518 SMART WD40_4 226 265 IPR001680 GO:0005515
Acco09g1556 518 SMART WD40_4 276 316 IPR001680 GO:0005515
Acco09g1556 518 SMART WD40_4 377 431 IPR001680 GO:0005515
Acco09g1556 518 SMART WD40_4 105 145 IPR001680 GO:0005515
Acco09g1556 518 SMART WD40_4 31 66 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1556 Acco-ChrAcco09 31691995 31698346 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1556 09 31691995 31698346 Acco07g0491 07 5924426 5931523 CCT
Acco07g0491 07 5924426 5931523 Acco09g1556 09 31691995 31698346 ECH
Acco09g1556 09 31691995 31698346 Acco09g1556 09 31691995 31698346 ECH