Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1543 ATGGGTTTTTTCTGGTGGTTCAGTATGATCACCATCTACCATTTCTTTACTGCGAAACTCATATCCTCGGACCCTTCTTTGAGCTCACCAAACAAACTCTCTTCGACATCCTCCGAATTCTTAAATTTTGCCAAGAAGCGTGAGGTTTTTGATTGGATGGTCGGAATCAGAAGGAAGCTTCACGAGAATCCTGAATTGAGTTCTGAGGAATTTCAGATCAGTGAGCTCATCAGACGAGAGCTTGATTCATTGGGCGTATCATATAAATACCCAGTCGCAGTCACTGGCGTTATTGGCTATATCGGTACCGGTCAACCTCCCTTTGTTGCTTTAAGAGCTGACATGGATGCTCTTCCTATTCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTTCCTGGAAAGATGCATGCTTGTGGTCATGATGCTCATGTGACTATGCTTCTGGGTGCCGCAAAGATACTCAAAGAGCATGAAAAAGATATACAGGGAACTGTAGTTCTTGTTTTCCAACCGGCAGAAGAAATGGACGGAGGGGCTAAGAGAATTATAGATGCTGGAGCCTTAGAAAATGTCTCTGCCATATTTGGATTGCATGTCCTACCAAACATACCTATAGGTGAAGTGGGCTCAAGATCTGGTCCTATTATGGCAGGAAGTGGCTTTTTTGAAGCAGTAATAAGTGGTAAGGGAGGTCATGCTGCTCTTCCTCAGCATTCTATTGACCCTATTTTGGCAGCTTCTAATGTGATTGTTAGCTTACAGCATCTTGTCTCTCGTGAGGCCGATCCTTTGGATTCTCAAGTAGTGACAATATCAAAATTTCATGGAGGTGGTGCATTCAATGTTATTCCAGATTCTGTCACTATTGGTGGCACCTTCCGTGCCTTTTCAAAACAAAGTTTAATGCAACTAAGGCAGCGGATTGTGGAGGTTATCACCGGACAAGCTGCTGTACAGAGGTGCAATGCAACAGTTAACTTCATCGAATCTAGCTTGAGCCTGGCGGTCATTAACGACGGAAAACTACACGAGCATTTTCGAGAGGTTGCAGAGAATATGCTTGGCGAAGGAAAGGTTAATAATGAGATGAAGCCAATAATGGGAGCTGAGGATTTCTCATCCTATCAAGAGGTTATCCCTGGTTACTTCTTTTTCATTGGAATGGAGGATGCTTCTTCTTTTGAACCACTTGAGTCTCTGCACTCACCTAATTTCAGAGTCAATGAAGATGTTCTTCCCTATGGAGCTGCACTTCATGCATCATTAGCTGGTAGTTATCTTGTTAAATTTCAGCAGCATGTAAAAGTTGCAAAAGAAACGGGTCATAACGAACTATGA 1341 0.431 MGFFWWFSMITIYHFFTAKLISSDPSLSSPNKLSSTSSEFLNFAKKREVFDWMVGIRRKLHENPELSSEEFQISELIRRELDSLGVSYKYPVAVTGVIGYIGTGQPPFVALRADMDALPIQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKEHEKDIQGTVVLVFQPAEEMDGGAKRIIDAGALENVSAIFGLHVLPNIPIGEVGSRSGPIMAGSGFFEAVISGKGGHAALPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTISKFHGGGAFNVIPDSVTIGGTFRAFSKQSLMQLRQRIVEVITGQAAVQRCNATVNFIESSLSLAVINDGKLHEHFREVAENMLGEGKVNNEMKPIMGAEDFSSYQEVIPGYFFFIGMEDASSFEPLESLHSPNFRVNEDVLPYGAALHASLAGSYLVKFQQHVKVAKETGHNEL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1543 446 SUPERFAMILY Zn-dependent exopeptidases 47 428 - -
Acco09g1543 446 Gene3D - 218 334 - -
Acco09g1543 446 NCBIfam amidohydrolase 53 415 IPR017439 GO:0016787
Acco09g1543 446 CDD M20_IAA_Hyd 53 428 IPR044757 GO:0009850|GO:0016787
Acco09g1543 446 Pfam Peptidase family M20/M25/M40 110 424 IPR002933 GO:0016787
Acco09g1543 446 SUPERFAMILY Bacterial exopeptidase dimerisation domain 219 328 IPR036264 -
Acco09g1543 446 PIRSF Amidohydrol_AmhX 37 431 IPR017439 GO:0016787
Acco09g1543 446 FunFam N-acetyldiaminopimelate deacetylase 218 335 - -
Acco09g1543 446 PANTHER PEPTIDASE M20 FAMILY MEMBER 32 437 IPR017439 GO:0016787
Acco09g1543 446 Pfam Peptidase dimerisation domain 219 315 IPR011650 -
Acco09g1543 446 Gene3D Zn peptidases 53 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1543 Acco-ChrAcco09 31574051 31576861 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1543 09 31574051 31576861 Acco07g0503 07 5996142 6000387 CCT
Acco09g1543 09 31574051 31576861 Acco09g1543 09 31574051 31576861 ECH