Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1401 ATGGAGTTAATTTCGGGTTTGCCTGGTGATCTCGCGCTCGACTGTTTGATTTGTGTTTCGTATCAGCAGTTCCCGGCGGTCGCCGCCGTCTGCAAAGCCTGGAAGACTGAGATTCAGATGCCGGAGTTTTGCCGTCGAAGGAAAGAAGCAGGGTATATGCAGAAGATCATCGTCATGGTTCAGGCAAGAGTTGAATCGGAGAATTCCCGGTCTGGGGCGATAAAAGGGGCGACGAACCCTTTTTACCGCCTGACAGTTTGTGAGCCGGAGACTGGTCTCTGGAGCGAGATGCCTCTGATTCCGGGTTTATCAGGCGGGTTGCCCATGTTCTGCCAGATTGCGGGTGTCGGGTTCGATCTGGTTGTGATGGGCGGATGGGATCCGGATTCGTATAAGGCGTCGAACTTGGTGTTTGTATATAACTTCGTATCGGGAAAGTGGCGCCGTGGGGCCGACATGCCCGGTGGTGCCAGGACGTTCTTCGGCTGCGCGTCCGATAAGTGGCGGTTCGTGTACATAGCCGGCGGGCACAGCGAGGACAAGAACGCGTTGAGGTCGGCGTTCGTGTATGACGTGGCAAGCGACGAGTGGGTCCCACTGCCTCACATGGCAAGAGAGCGTGACGAGTGCAAGGCCATATTCCACAACGGGAAGTTCAGAGTGATCGGAGGGTACCGCACGGAGAGGCAGGGACGGTTCGAGAGAACCGCGGAGGCCTTCGATGTTGCCACGTGGAAGTGGGACCCTTTGGAGGAGGAGTACCTAGATGCGGCCATGTGTCCGAGGACATGCGTGTACGGCGGAGACGGCGATGAGAAAGTGTACATGTGCGGCGCTGGTGGGGATGTGATTGCTCGGCACGGCGACACGTGGCAGACGATCGCCAAGTTGGGAGATGAGATCCGCACCGTTGCGCTCGTGATGCCGTGGGACGGGAAGATGCTGTTGATGGGATCAAGTGCGTACAGTGAACCGCACGTGGGAATTGTACTGGACCTGAAAACCGGTAACAGCAGAAAGTTGGAAATCCCTCCGAAGTACACAGGCCACGTTCAGTCCGGTTGTCTTCTAGAAATTTAA 1080 0.5648 MELISGLPGDLALDCLICVSYQQFPAVAAVCKAWKTEIQMPEFCRRRKEAGYMQKIIVMVQARVESENSRSGAIKGATNPFYRLTVCEPETGLWSEMPLIPGLSGGLPMFCQIAGVGFDLVVMGGWDPDSYKASNLVFVYNFVSGKWRRGADMPGGARTFFGCASDKWRFVYIAGGHSEDKNALRSAFVYDVASDEWVPLPHMARERDECKAIFHNGKFRVIGGYRTERQGRFERTAEAFDVATWKWDPLEEEYLDAAMCPRTCVYGGDGDEKVYMCGAGGDVIARHGDTWQTIAKLGDEIRTVALVMPWDGKMLLMGSSAYSEPHVGIVLDLKTGNSRKLEIPPKYTGHVQSGCLLEI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1401 359 Gene3D - 11 294 IPR015915 GO:0005515
Acco09g1401 359 Pfam Kelch motif 171 203 IPR006652 GO:0005515
Acco09g1401 359 Pfam Kelch motif 120 154 IPR006652 GO:0005515
Acco09g1401 359 CDD F-box_AtAFR-like 3 47 - -
Acco09g1401 359 PANTHER OS02G0208700 PROTEIN 2 359 IPR044595 GO:0080037|GO:2000762
Acco09g1401 359 SMART kelc_smart 170 217 IPR006652 GO:0005515
Acco09g1401 359 SMART kelc_smart 119 167 IPR006652 GO:0005515
Acco09g1401 359 SUPERFAMILY Kelch motif 79 320 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1401 Acco-ChrAcco09 29526333 29527412 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1401 09 29526333 29527412 Acco07g0671 07 8075205 8076290 CCT
Acco09g1401 09 29526333 29527412 Acco09g1401 09 29526333 29527412 ECH