Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0309 ATGTCCCTCCAAAACCCACCGTTCAAAGACCTCCCAGACGCATCCCCTAAACGAGACAAGAAAAGTTTCGTCACTTCTCTAATGGAAGCCGCCACACTCCGTACGCCTTCCTTCAAAGAAGACACCTACTTCGTTTCCCATTTGAAATCCTCCGAGAAAAAATCCCTACAAGACCTCAAAAACAAGCTCGCTGCCTCCGAGGTTTCGGATTCGTCCATGTGGGGCGTCCCCTTGCTTGGCGGCGACGACAGGGCTGACGTCATACTGTTGAAATTCCTCCGGGCTAGGGACTTCAGGGTGGGAGATTCTCTCAACATGCTTCTGAAATGCTTGGATTGGAGGAAGGAGTTCGGAGCAGACGACGTCGTTGAGGAGGATTTTGGCTTCAAAGAGCTTGAAGGTGTTGTCGCCTACATGCAGGGTTATGATAAAGAAGGACACCCAGTTTGCTATAATGCTTATGGAGTTTTCAGAGACAAAGAAATGTATGAAAGAATCTTCGGTGACGAAGAGAAGCTTAAGAAATTCTTGAGATGGAGGGTTCAAGTTCTTGAAAGAGGAATCAAGCTTCTTCATTTCAAACCGGGTGGTGTTAATTCTCTGATTCAGGTCACAGATTTGAAGGATATGCCCAAGAGAGAGCTCAGGGCAGCTTCTAATCACATTCTATCTCTGTTTCAAGACAATTATCCAGAAATGGTGGCCCGTAAGATTTTCATTAATGTGCCCTGGTACTTCAGCATGTTGTATTCAATGTTCAGTCCATTTTTGACCCAAAGAACAAAGAGTAAATTTGTGATCGCCAAGGAGGGAAATGCTGCAGAGACACTCTATAAATTCATAAGGCCTGAGGATATTCCAGTTCAGTATGGGGGACTGAATCGGCCAAATGATTTGCAGAATGGTCCCCCTAAACCTGCTTCTGAGTTCACTGTTAAAGGAGGAGAGAAGGTGAACATCCAAATCGAAGGAATTGAGGGTGGAGCTACGATAACATGGGACATGGTGGTGGGAGGGTGGGACTTAGAGTACAGTGCAGAGTTTGTGCCAAGTGCACAAGGAAGCTACAGCATAGCAGTAGAGAAGGCAAGGAAGATTGGAGCCTCAGAGGAAGCCATTCACAACTCTTTCACTGCAAAAGAAGCTGGAAATCTGGTCCTCTCTGTCGATAACTTCGCATCCAGAAAGAAAAAGGTCGCCGCTTATCGCTACTTTGTCCGCAAAAACAGCAGCAACGACAATAACAACAATGTCTGA 1257 0.4606 MSLQNPPFKDLPDASPKRDKKSFVTSLMEAATLRTPSFKEDTYFVSHLKSSEKKSLQDLKNKLAASEVSDSSMWGVPLLGGDDRADVILLKFLRARDFRVGDSLNMLLKCLDWRKEFGADDVVEEDFGFKELEGVVAYMQGYDKEGHPVCYNAYGVFRDKEMYERIFGDEEKLKKFLRWRVQVLERGIKLLHFKPGGVNSLIQVTDLKDMPKRELRAASNHILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVIAKEGNAAETLYKFIRPEDIPVQYGGLNRPNDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDMVVGGWDLEYSAEFVPSAQGSYSIAVEKARKIGASEEAIHNSFTAKEAGNLVLSVDNFASRKKKVAAYRYFVRKNSSNDNNNNV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0309 418 Pfam CRAL/TRIO domain 133 292 IPR001251 -
Acco09g0309 418 SUPERFAMILY CRAL/TRIO domain 130 295 IPR036865 -
Acco09g0309 418 MobiDBLite consensus disorder prediction 1 20 - -
Acco09g0309 418 ProSiteProfiles GOLD domain profile. 274 408 IPR009038 -
Acco09g0309 418 PANTHER PATELLIN-1 25 408 IPR044834 GO:0008289
Acco09g0309 418 SMART CRAL_TRIO_N_2 85 110 IPR011074 -
Acco09g0309 418 Pfam CRAL/TRIO, N-terminal domain 46 108 IPR011074 -
Acco09g0309 418 SUPERFAMILY CRAL/TRIO N-terminal domain 44 126 IPR036273 -
Acco09g0309 418 FunFam SEC14 cytosolic factor family protein 133 308 - -
Acco09g0309 418 Gene3D - 118 303 IPR036865 -
Acco09g0309 418 Gene3D GOLD domain 304 406 - -
Acco09g0309 418 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 309 408 IPR036598 -
Acco09g0309 418 Gene3D - 43 116 - -
Acco09g0309 418 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 141 298 IPR001251 -
Acco09g0309 418 SMART sec14_4 131 295 IPR001251 -
Acco09g0309 418 FunFam SEC14 cytosolic factor family protein 44 116 - -
Acco09g0309 418 CDD SEC14 129 293 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0309 Acco-ChrAcco09 3756676 3758436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0309 89 287 Acyl Lipid Metabolism Gene Families AT1G55840 27.700 6.76e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0309 09 3756676 3758436 Acco07g2126 07 39083202 39084978 CCT
Acco09g0309 09 3756676 3758436 Acco09g0309 09 3756676 3758436 ECH