Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0213 ATGCCGGAGGAAAGAGCCGTTATATCACGGTGCAAAGTTCCCGCCCTAAACAGTTCTCCGTACGGCTACGACGACCCTCAGCCTCTATGGAAGAACGAGACCAGTAGCCTCTGTCTCACTCGCAGTCGCGGTGGCACTCCTAGTAAATTCGCTTGCGTTTCTGTAGAAGAACGGAAATTGGATAAGGATTTATTTCCCAGTCCTCCTCAGCTCTTGAAGCATCCGCTTGCTATCATTGCACTCGTGCCCAAAGACGCCGCCCTCTTCCTCGCCGGTGCTATTGCCGGCGCTGCTGCCAAGACCGTCACAGCTCCTCTCGACCGTATCAAAATTCTTATGCAGACTCATGGAGTGCGAGTTGGGCAAGAAAGTGCTAAAAAGGTGATAACTTTTGTCGAGGCTGTAACAGTTATAGGAAAGGAAGAAGGCATTAAGGGTTACTGGAAGGGGAACCTCCCCCAGGTTATTCGGGTGATACCTTATAGTGCTGTCCAGCTTTTTGCATATGAAATTTATAAGAAATTGTTCAGGGGAAAGGATGGTGAGCTATCTGTTGTTGGAAGACTTGCGGCAGGAGCTTGTGCTGGCATGACATCCACTTTTGTAACGTACCCATTAGATGTTCTGAGATTACGATTAGCAGTTGAACCAGGTTATCGAACCATGTCACAGGTTGCCTTGAGCATGCTAAGAGAGGAAGGTTTGGCGTCATTCTATCATGGCCTTGGGCCTTCTCTTATCGGAATTGCTCCTTATATTGCAGTGAACTTTTGTGTTTTTGACTTGTTAAAGAAGTCTTTGCCAGAAAAGTATCAAAAGAGAACTGAAACATCTCTAATCACAGCTGTGCTTTCTGCATCCCTTGCCACACTTACATGCTATCCTCTGGACACTGTACGAAGGCAGATGCAATTGAAGGGCACACCTTATAAGACTGTTTTAGAAGCCCTTTCAGGTATCATGGCACGCGAGGGAGTTATTGGCTTGTATCGGGGCTTCATACCAAACGCTTTGAAAACCCTACCCAATAGCAGTATCAGGCTTACCACGTATGACACTATTAAACGGGTAATTGCAGCTGGTGAGAAAGAGTTCCAAACAATTGCAGAGGAGAATCGCCAGAAACAGAACCAAGCAAATAAATAA 1146 0.4651 MPEERAVISRCKVPALNSSPYGYDDPQPLWKNETSSLCLTRSRGGTPSKFACVSVEERKLDKDLFPSPPQLLKHPLAIIALVPKDAALFLAGAIAGAAAKTVTAPLDRIKILMQTHGVRVGQESAKKVITFVEAVTVIGKEEGIKGYWKGNLPQVIRVIPYSAVQLFAYEIYKKLFRGKDGELSVVGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYRTMSQVALSMLREEGLASFYHGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLITAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLEALSGIMAREGVIGLYRGFIPNALKTLPNSSIRLTTYDTIKRVIAAGEKEFQTIAEENRQKQNQANK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0213 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 266 IPR018108 -
Acco09g0213 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 175 IPR018108 -
Acco09g0213 381 PRINTS Mitochondrial carrier protein signature 150 170 IPR002067 GO:0055085
Acco09g0213 381 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Acco09g0213 381 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Acco09g0213 381 PRINTS Mitochondrial carrier protein signature 282 304 IPR002067 GO:0055085
Acco09g0213 381 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Acco09g0213 381 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Acco09g0213 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 357 IPR018108 -
Acco09g0213 381 Gene3D Mitochondrial carrier domain 85 366 IPR023395 -
Acco09g0213 381 PANTHER SOLUTE CARRIER FAMILY 25 84 358 - -
Acco09g0213 381 FunFam Envelope ADP,ATP carrier protein 85 363 - -
Acco09g0213 381 Pfam Mitochondrial carrier protein 182 269 IPR018108 -
Acco09g0213 381 Pfam Mitochondrial carrier protein 277 359 IPR018108 -
Acco09g0213 381 Pfam Mitochondrial carrier protein 88 178 IPR018108 -
Acco09g0213 381 SUPERFAMILY Mitochondrial carrier 86 353 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0213 Acco-ChrAcco09 2467297 2471962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0213 1 377 Organic Solute Cotransporters AT3G51870 67.810 0.0 516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g2029 07 38003694 38007430 Acco09g0213 09 2467297 2471962 CCT
Acco09g0213 09 2467297 2471962 Acco09g0213 09 2467297 2471962 ECH