Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2334 ATGACTTCTATTAATAATATGTTTCCTACTCATGGTTGGGGTTGGGAGTATCTCTCAAAATTGTTTGTCGTTCTTTATGGTTTTGATTCGAATATGTTGGCGAAGCTGGGTACTTGTTCAGATAGGATTAACGAATTCCCAGTTGGGGGCTTTAGGGTTTCACCTTTCTTCTTACTTATTATTTTTTCACAACAGGTATCACCTGGATCTGGAAATATAATTGTCAGATATCCTATTACTCAGAACGCTGATATGAAACGTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTCAACCGTGCTTGCATGGGGTCAAAGGTTGAGTTCTCTGATGAAAATTGCCGTTTAGCGGGGAGTAATCATTATTCTATGGATGAAGGTGATATATCTTCTCTCAGGAGCAGGGCTCTTGAAAGCATTCAGCATGCTGACATGCTCAGTGTCAATTCCAGCCATGACTCTCTATCTGAAAATGTGGATAGTAAACAGACTTTGTCAAGTAAGTGTCAGGAGTCTAAGTACCTAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCGAGTGATGCTAATTTAGCAAACAGTAGTCATCCCAAGATTGTAGACAAAAGAAATGTACCTTGTAGTCCAGCTTCGGTTAATATTTTAGGGGCAGAAGGATCTGTAAGTGTACAATCTCCTGACATGTCTGGCTTACCTGAGACTCCTCCTTCTAAAGATGTGGATACCGATGAGAGCTCACCTAAGGTACACAGCCAAGATGCAAAGTCTCTAAGTGTTAAGTCACATTCGACTATTCCAAGGTTAATGGATGTGGAAAGAGATGAAGATTCTCTTATTCCAGAAAAACCTGAATGCTGCACTGAAAATGCTGATTCATCATTGAGAAAAGTGATAGCAACTTCGGTTGCTTCTGGTGAGAACCCTATTGCTGATAAGGATAATCTTATTGATGGTAGCGACATGGCTTCACTTAAAACATATTCCAAGTCAGAAGCTGATGCTGCCAATGAAGATGGGGGTGCCCCAGATGAATCTCATAATGCTGCAGTCCAAGATGAGCGAGATAAAGCTGAGCAACCCCTCGGATCAACTGGCAAGGAGGAGCCTCAGTCTGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGGGAAGAACTTCTTGCCATATGTAGTAGGTGCAGTGATGGTGCCGAGCACACTTATTGCATGCGGGAAATGCTTCAGAAGGTCCCTGAAGGAGATTGGCTATGTGAAGAATGCAAAGAGACAGAAAATCAGAGGCTAGATGTTGAAGACAGAAAAATTTCAAAATTTAGTTCAACACCACAACATTCTGGCAAGAGGCTGTCTGAGAATATAGAACTGGCTCCTGTACCAAAAAGGCAGGTTCTTGAATCAAGCTCAGGCTCACCGAAGTCATCAAGCCCCAAGAGAATTGTTGCACTTCCTCAAGAACCTTCATTGAAGAGCTTAGATAAAGGTAAGGTGAAGCCTGATAATCAGATGCTTATACGAAATCAGTCTGGCGGTGATAACATGGAAACAGTTTGTTCTCCTTCTGGGCCCCGGAGTCTACTTCGAAAGGGTCTGTTGAAATCTAGTTCATTCAACGTGTTAAATTCAAAGCCTCGGGTCAAACCCGTTGATGAAGTTATCCCCCAAAAGCTGAAAGGGTCTAGTGAAAATACTTCTAAGAATTTGGAGACACCTGCCCGGATGATAGGAAAATCTATGTCATTTAAATCCATGAACTTGGGTCGTTCCAGTACAACTGCATCAAAAGTTAAACCCCTTTCATCAAAATCTGTTCCTGCTCAGGATTTGAAAGGAACAAGGCTTGCAAAAGACTCCAGTGCATTTGACAGGAAAATTCTCTCCAGGGTAGATCGATCAGCGGCTTGCTCAACAATGGCTACCCCTGTTGTCTCAACACCCAAAGGTGATCAGAAGAGCACAACTCTTAGTGAAACTATTAAACCTTCATCAGTTGGCAACAACCGAGACTTGAAGGTGAATCAAGATGGAAAATTAAGTAACTTATCAAAGTCTACTAGTAACGTAGGCCGTAAGAGTGTAGAACCAGAAGTCTGTTCAGGGAGAATATATACCAGCGGTGATGAATCTGTACAAGATTTGCAGCCTCGATTACGAGAAATAGCCAATCCTGTTGAGAAAACTAGAGATAACTCTAGCGATCGTGTGAAGACAGATGCCATTGCTACTTCCAAAGGATGCTGTCAAAAGTGTAAGGAGTTTGGTCATGCTACAGAATGTTGCACAATTGGTAAAACCCAAGAATCTGGTTGTGAAATTTCTGTTGCTACCGCTAGTAGTTCTATAGAGGAGATGCATAAAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCATTGCTTAGAATGCCTGAAATGTACAAAAAGAAAGAAGTGGCTAATCAAATGGATGAGCTTGTCACAGACGTGAAATGTGAAGCCACAGTTCAAGACCAAGTACTTGGTTCTGGCACGCCAAAGAATAGTATATCTGCTGAAGAAATTTTTGATGTGAAGGACGCAATCGATAGCTCTGCAGCTGCATCTTTGAAATTTTCATCTGGTGAAAAACAGCTTAACTTATGCCGAATTGATTCTTGTTCTCAATTAGGAATCTCAGGTGTTGTTGGAAAGATTGCTGTGAGAGACTTTCCTAATCAACCTCTGGCAATCTCACGTGTTTTTCCAAAGATGGCTGTTCCAGAATATGAATGCATCTGGAAGGGTATCTTTGAGCTGCATAGGAGTGGAAAGCCTCCTGACTTGTGTCCTGGAATTCAAGCGCATTTGTCAACTTGTGCTTCCCCAAAGGTTCTTGAAGTGGTGAATAGGTTACCATCCAAAATTTCTCTTAGTGAAGTTCCTCGCTCAAGCACGTGGCCTTCACAGTTTCATCAAGGTGGTGCTAAAGAAAATAATATTGCACTTTACTTCTTTGCCCAAGATATTGAAAGTCATGAGAAACACTATGGGGCTCTATTGGATCACATGATGAGGAATGATTTAGCTCTTAAAGGAATCTTTCATGGTGTTGAACTACTCATATTCCCATCCAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTTAGGGGGGGAAGGATAAATCATTCAGACTCTGCAGAAAAGACATGTATTGTGATGCCGGTTAAAAAGGATTTTCCCACTGCCATTGTGACTTTGTCTGAGATGCACTGCTCACCAAAGCGAATGGATGAAGAGTCAATTGCTGGTGATAGGACATGTACAGTTCTCCCATCTACTTCCCTAGACCAGGATCAAGCTACACTAAGTAGGAATTTTGATGGCGAAGAATCTAATCTGGACCGGAAACAGTCAGGCTCACAAGTAAACTTAGAGGAGCAAGATAGTAAAATTGACACCAAACCTACATCATGCAGTCTGGCTAGTGGTGCACAGTTCTGTCAAGAGTTGAAATCTGCTGGTTCATCTATGAATGGTAGTCCCCTGGAACATGGACCAGCAAAAGAGTCCGCACCTTCTCCTGGAGCAATGGGAACAAATATTATTACTAGGATTATAGAAACAAAAGTTGATCCTAATATGTCTGTTAAAGAAGAGAAGTCTTTGCCTTCAGAGATCCCTCCTCTTCGCTCTCAAGAGATATGTGTTGCAAGCACTGCCAGTGAGGGCAAATTTTCTGAGAGAATGGCAGGTGATATTAATCAACAAAGGCATATAAAGCAACAGAAAGATGATCAATATATTGACATTGAGACGGCTTTTCAGGGAGAGCTAACTGCAGAAGGGGTGAAACTTCAGCTGCCAAGTGATAAAAGGTTTCAGCATATTGATCTGATGGACACTGCCATGCAGACTTCTGAAGTTACATGCAAGAGACATTGGAGCGAAGCTGATGTCAAATTAGAAGATGGAGAAAATTCTAGCAAGAAGCTGAAAACTGAAGACTGTGGAGCTTTTGGATGTAGCAGTTCTGGAGGTAGCGATTCTTATGGGACCAATTTTGCAACACATGGAAATGGTCTTGGTACTGGTTCTTCAATCAAGGACAAAGGATGTGGTGATATCCGTGATGAGAAAATCATCCGGGAAGACTTGGGAACAAGGGAAAGAACTTTCTTTCCTGTTGATGCGCATAACATAAACGATTCTCATCTGGGTCCAAATAGCTTGCCTCATCTGGGTCCAAATAGCTTGTCGTTGGAAGGGCCTCGTGTGTATGATAATCAATTTCATGATGAGATACCAAATTTAGAACTCGGTTTAGGGGGTGAAATGAAACCACCACACAAGGGAATGCTGCCTTTCTTTGTTGGGGAGATAGAGAAGAAGCATTGTTGGGAAAAGCCTCAAGATTGCTTGGCAGATGAGCAAGAGGATGATGGTGTTGCAGCATCTCTCTCTCTCTCGTTATCATTTCCATCTTCAAACAAAGAACGCGTTAAAACTGTTTCGAAAGCAGAGCAGATTTTGCCTGATGGACGCCATGTGAATACTTCGTGGCTCCTTTATGGGAGATTTGCGGAGAAATGA 4635 0.4192 MTSINNMFPTHGWGWEYLSKLFVVLYGFDSNMLAKLGTCSDRINEFPVGGFRVSPFFLLIIFSQQVSPGSGNIIVRYPITQNADMKRESGTCNVCSAPCSSCMHFNRACMGSKVEFSDENCRLAGSNHYSMDEGDISSLRSRALESIQHADMLSVNSSHDSLSENVDSKQTLSSKCQESKYLEGLDDNTSCISRASDANLANSSHPKIVDKRNVPCSPASVNILGAEGSVSVQSPDMSGLPETPPSKDVDTDESSPKVHSQDAKSLSVKSHSTIPRLMDVERDEDSLIPEKPECCTENADSSLRKVIATSVASGENPIADKDNLIDGSDMASLKTYSKSEADAANEDGGAPDESHNAAVQDERDKAEQPLGSTGKEEPQSEDESDESDVVEHDVKVCDICGDAGREELLAICSRCSDGAEHTYCMREMLQKVPEGDWLCEECKETENQRLDVEDRKISKFSSTPQHSGKRLSENIELAPVPKRQVLESSSGSPKSSSPKRIVALPQEPSLKSLDKGKVKPDNQMLIRNQSGGDNMETVCSPSGPRSLLRKGLLKSSSFNVLNSKPRVKPVDEVIPQKLKGSSENTSKNLETPARMIGKSMSFKSMNLGRSSTTASKVKPLSSKSVPAQDLKGTRLAKDSSAFDRKILSRVDRSAACSTMATPVVSTPKGDQKSTTLSETIKPSSVGNNRDLKVNQDGKLSNLSKSTSNVGRKSVEPEVCSGRIYTSGDESVQDLQPRLREIANPVEKTRDNSSDRVKTDAIATSKGCCQKCKEFGHATECCTIGKTQESGCEISVATASSSIEEMHKSDNVKAALQAALLRMPEMYKKKEVANQMDELVTDVKCEATVQDQVLGSGTPKNSISAEEIFDVKDAIDSSAAASLKFSSGEKQLNLCRIDSCSQLGISGVVGKIAVRDFPNQPLAISRVFPKMAVPEYECIWKGIFELHRSGKPPDLCPGIQAHLSTCASPKVLEVVNRLPSKISLSEVPRSSTWPSQFHQGGAKENNIALYFFAQDIESHEKHYGALLDHMMRNDLALKGIFHGVELLIFPSNQLPEKSQRWNMLFFLWGVFRGGRINHSDSAEKTCIVMPVKKDFPTAIVTLSEMHCSPKRMDEESIAGDRTCTVLPSTSLDQDQATLSRNFDGEESNLDRKQSGSQVNLEEQDSKIDTKPTSCSLASGAQFCQELKSAGSSMNGSPLEHGPAKESAPSPGAMGTNIITRIIETKVDPNMSVKEEKSLPSEIPPLRSQEICVASTASEGKFSERMAGDINQQRHIKQQKDDQYIDIETAFQGELTAEGVKLQLPSDKRFQHIDLMDTAMQTSEVTCKRHWSEADVKLEDGENSSKKLKTEDCGAFGCSSSGGSDSYGTNFATHGNGLGTGSSIKDKGCGDIRDEKIIREDLGTRERTFFPVDAHNINDSHLGPNSLPHLGPNSLSLEGPRVYDNQFHDEIPNLELGLGGEMKPPHKGMLPFFVGEIEKKHCWEKPQDCLADEQEDDGVAASLSLSLSFPSSNKERVKTVSKAEQILPDGRHVNTSWLLYGRFAEK 1544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2334 1544 SUPERFAMILY FYVE/PHD zinc finger 383 446 IPR011011 -
Acco08g2334 1544 PANTHER - 394 1108 - -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 338 390 - -
Acco08g2334 1544 SMART PHD_3 396 443 IPR001965 -
Acco08g2334 1544 ProSiteProfiles Zinc finger PHD-type profile. 394 445 IPR019787 -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 661 711 - -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 230 299 - -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 275 291 - -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 1187 1211 - -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 485 499 - -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 481 522 - -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 1140 1172 - -
Acco08g2334 1544 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 338 458 IPR013083 -
Acco08g2334 1544 MobiDBLite consensus disorder prediction 356 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2334 Acco-ChrAcco08 39278341 39289940 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g2334 08 39278341 39289940 Acco08g2334 08 39278341 39289940 ECH