Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco08g2038 | ATGGCATTTCACGTTGCTTGCCCAATTACATGTCGCCGAATTTGCTTCTGCTCGCTAGGGTTTCCTCTCGCCCTCCATACATCGAAGGCTAAGCATGAGTTCTTGGACGATGTGGCAAGAATCGATGAGTTTTTCAAGGACCCTTTGGGAATTAGGGCTCCAGAAAGGGAACAGACCGTGCAAATCGCCGTCCCTAAGGTTGTGCCGCCGCCGCTGCCACCTCAGCGGCCGTTGCAGTCAACGGCGGTGGCTGATGGGGTCCCCACTGTCGATGAGGTGGACGAGGCAGTGTCAACTAAGGCCAAAAGGGTCGCGTTGCAGCGGAAGGGGGCTGCCGCGATGATTGCTGCCGAGGAGTACGCCCGTCAGTTTGAGTCCGCGGATGCGGTGGATGCATCAGGAAGTCTTGCTGGGGAAGAGCATGGTAATTTGAACGTTAAAGTCTTTTGCCGAATGTGCAATCGTGTTGAAGATGAAGGAAGTGAAAGAGCTAAAAAAATGCTTTCATGCAAAAGTTGTGGTAAGAAGTACCATCGGAACTGCTTAAGAAGTTGGGCTCAACATAGAGATTTATTTCATTGGAGTTCATGGACTTGTCGTGCTTGCCGAATGTGTGAGGCCTGTAGAAGGACAGGAGACCCAAGTAAGTTCATGTTTTGTAAAAGGTGTGATGGTGCTTATCATTGTTATTGTCTACATCCTCCTCACAAGAATGTTAGTTCCGGGCCTTATTTGTGCTCAAAACATACAAGGTGCCACAGCTGTGGATCCAATGTTCCTGGAAATGGTCTTAGTGTGAGGTGGTTTCTGGGATACACCTGCTGTGATGCATGTGGGAGATTGTTTGTCAAAGGAAACTATTGTCCTGTTTGTCTGAAGGTCTATAGAGATTCAGAATCAACACCAATGGTTTGCTGTGATATTTGCCAGCGTTGGGTGCACTGCCAGTGTGATAATATAAGTGATGAAAAATACCTTCAATTTCAAGTGGATGGTAATCTACAGTATAAATGTCCCACATGTCGTGGGGAATGTTATCAGGTCAAGGATCTTGAGGATGCTGTTAAAGAACTCTGGAAGAGAAGAGATATTGCTGACAGAGACTTGATTGCTAGCTTGAGGGCTGCAGCTGGTTTACCAACTCAAGAAGAAATATTTTCTATTTCACCTTATTCAGATGATGAGGATAGCGAGCCTGTAAAAGCAAAGAGTGAATCTGTTCGATCTTTTAAGTTCTCTCTGAAGAATTTCTCTGATCACTCGCCAAAGAAGACAAAAGATTATGCAAAGAAATGTTCAAGTAAAAAGTCTGCCAAGAAAAAGGACTATCAGACTGGTAAAACTGATCCAAGTTTGGAAGGACATAGTGATGTCAAATCTGTGCATAGCTTGGATGATGATATCCAATCCCATAGACATGAAGTTCCTGATGTTTATTCTTCACCTGCTGGTGGAAGCCTGAGTCAAACTGAAGGGAATGCTAATCAGACAGGGATTTTGAAACAGAAGTTTGTAGATGAGGTCATGATCAGTGATGAGGAGAGAAAACCTAGAGTTGTTCGAATAAAGAGTAGTAAGGCTCAAACTCTTGATAGTGAAGAGGAGACTGGAAAAAGTGGTGATAAGAATCAGAATGTGAGGGGAAAGAAGTTGGTTATAAATTTTGGGGCTCGGAAAATTAACATGACTAATTCTCCACGGTCTGATACTTCAAGTTGCCAAAAAGATCAAGATCTTGTTAGCACTAATGGCAATGAAGATATTAGCCAATCAGGGAAAGGAGACAAGTTTATGCTAGACAGACATGATGGCACAGCTAGAAATGCTGATGGTAAAGGAAACAGAGTTGAATCTCGCCAATCAAAAGATTTAAAGGTTTCAGAAAGAGAGAGAAATTTGATGAAGCCTGCAAAAATTAAGCCAGAAGTTTCTGAATTGAACTCAGCCTCTGTTAGGAGCAATGTTGCTGATGGGAGTGAATCTGTTCCCATAGAGCGACCTCTTATCTTATTTGGGAAGCGCCGCACTGAGAGAACGACTAGTCAAGACGGAGCTGTACAAACCATGTCACAAGGGGAGAGGATGCTTATGGGGAAGCAGTCAGAAGGCAGGTCTGATTATGATGAGACAGATAACAACGCTAATCATACACCAACATATTCTTTGCCAAAAGACCCTAAACCTTTGTTGAGATTGAAATTTAAGAAACCTAGCATAGAAAGTCAAAATTCTCTTCATCGTGATGATGAGAAGATTACAATCAAAGGGCAGAGGTCAAAAAGGAAGAGGCCTTCACCTTTCATGGAGAAAGTGTCGAACAATGAAGATGAAGATGTAGCTCAATCGCATCAAGATGGTGTAATGGATGAAATCTTGGAGGCTAATTGGATATTGATGAAATTGGGCAAAGATGCCATTGGAAAGAGAGTTGAAGTTCATCAGGCGTCTGACAATTCTTGGCACAAGGGATCAGTTACTGGTGTCATTGACGGAACTTCAAAGATATCTGTTACCTTGGAGGATGGTAAGGTGAAGACCTTGGAGCTCCGGAAGCAAGGAGTACGTTTTATTCCTCATAAGCAAAAGAGATCAAAAGCTTGA | 2601 | 0.4333 | MAFHVACPITCRRICFCSLGFPLALHTSKAKHEFLDDVARIDEFFKDPLGIRAPEREQTVQIAVPKVVPPPLPPQRPLQSTAVADGVPTVDEVDEAVSTKAKRVALQRKGAAAMIAAEEYARQFESADAVDASGSLAGEEHGNLNVKVFCRMCNRVEDEGSERAKKMLSCKSCGKKYHRNCLRSWAQHRDLFHWSSWTCRACRMCEACRRTGDPSKFMFCKRCDGAYHCYCLHPPHKNVSSGPYLCSKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCQCDNISDEKYLQFQVDGNLQYKCPTCRGECYQVKDLEDAVKELWKRRDIADRDLIASLRAAAGLPTQEEIFSISPYSDDEDSEPVKAKSESVRSFKFSLKNFSDHSPKKTKDYAKKCSSKKSAKKKDYQTGKTDPSLEGHSDVKSVHSLDDDIQSHRHEVPDVYSSPAGGSLSQTEGNANQTGILKQKFVDEVMISDEERKPRVVRIKSSKAQTLDSEEETGKSGDKNQNVRGKKLVINFGARKINMTNSPRSDTSSCQKDQDLVSTNGNEDISQSGKGDKFMLDRHDGTARNADGKGNRVESRQSKDLKVSERERNLMKPAKIKPEVSELNSASVRSNVADGSESVPIERPLILFGKRRTERTTSQDGAVQTMSQGERMLMGKQSEGRSDYDETDNNANHTPTYSLPKDPKPLLRLKFKKPSIESQNSLHRDDEKITIKGQRSKRKRPSPFMEKVSNNEDEDVAQSHQDGVMDEILEANWILMKLGKDAIGKRVEVHQASDNSWHKGSVTGVIDGTSKISVTLEDGKVKTLELRKQGVRFIPHKQKRSKA | 866 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 681 | 695 | - | - | |
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 420 | 459 | - | - | |
| Acco08g2038 | 866 | ProSitePatterns | Zinc finger PHD-type signature. | 150 | 202 | IPR019786 | - | |
| Acco08g2038 | 866 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 143 | 259 | IPR013083 | - | |
| Acco08g2038 | 866 | ProSiteProfiles | Zinc finger PHD-type profile. | 147 | 205 | IPR019787 | - | |
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 558 | 590 | - | - | |
| Acco08g2038 | 866 | ProSiteProfiles | Zinc finger PHD-type profile. | 285 | 344 | IPR019787 | - | |
| Acco08g2038 | 866 | FunFam | PHD finger family protein | 144 | 259 | - | - | |
| Acco08g2038 | 866 | FunFam | PHD finger family protein | 282 | 344 | - | - | |
| Acco08g2038 | 866 | PANTHER | HL01030P-RELATED | 70 | 661 | - | - | |
| Acco08g2038 | 866 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 282 | 344 | IPR013083 | - | |
| Acco08g2038 | 866 | SUPERFAMILY | FYVE/PHD zinc finger | 194 | 255 | IPR011011 | - | |
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 475 | 498 | - | - | |
| Acco08g2038 | 866 | SMART | PHD_3 | 204 | 250 | IPR001965 | - | |
| Acco08g2038 | 866 | SMART | PHD_3 | 287 | 342 | IPR001965 | - | |
| Acco08g2038 | 866 | SMART | PHD_3 | 149 | 203 | IPR001965 | - | |
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 515 | 728 | - | - | |
| Acco08g2038 | 866 | SUPERFAMILY | FYVE/PHD zinc finger | 141 | 205 | IPR011011 | - | |
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 593 | 638 | - | - | |
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 752 | 781 | - | - | |
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 482 | 498 | - | - | |
| Acco08g2038 | 866 | MobiDBLite | consensus disorder prediction | 515 | 545 | - | - | |
| Acco08g2038 | 866 | SUPERFAMILY | FYVE/PHD zinc finger | 285 | 343 | IPR011011 | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Acco08g2038 | 08 | 34860707 | 34868317 | Acco08g2038 | 08 | 34860707 | 34868317 | ECH |