Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2016 ATGGCTAGTCTCAGCCTCACTTCCAGAATCTCGTCCTCCCCTATAGCCATGGCCACTTGCGCCCCACACTCATCTCTCATGCTAACTCCTCACACTTCCTCTGTAAATCCACAAGACCTCACTCCTTCGCTTTCCTCCTTCATTTCTAAACCCTTGTCTAGAAATTTCTCAATCTTCCCTTTGCGTTTAAAGACTCGAGGGAGAATCTCTGGCAAATGGATTGACGTAAAATTGCAGAAGGAAGCTAATTCTAGGGTTTCCCTTGTCGTTGTCGCTTCTTTGGCGACGGAGGTGGAGCTGAGGGATGATAGGTCCGCCACGAATACTATCACTAAATCCAAGCCTAAGAAAGGCAAGGCCGCATTTCCTCTCAAAACGGACAGGATGAGATGCAAGAGGTTATTAGAGATTGAAAGACTGAGGGAGAATATAAAGGAGTATGACTTGAAGACAGCAATATCTTTACTAAAACAAACAGAAAATAAAAAAATTGTAGGAACAGTACAAGCCCATTTTCGTCTCAACCTTGACCCCAAACATTATGATCAACAATTACGGGCAACAGTAAATTTACCCAAGGGAACTGGAAAGCCTGTCAAAGTGGCTGTTCTTACTCAAGGGGAACAGGTCAATGAAGCAAAAGAAGCTGGAGCAGATTTGGTGGGTGGAGAGGACCTGATAGAACAGATAAAAGGAGGATTTATGGAATTTGATAAATTGATTGCTTCTCTTGATATGATGCCTAAGGTTGCTAGTCTTGGTGAAATTCTGGAGCCAAGGGGCCTGATGCCTGATCCAATAGCTGGTACTGTAACAGCCTATATTCCTCAGGCCATAGCGGAATTCAAGCAAGAAAAGGTTGAATACAGAGCAGATAAAACTGGAATTGTACACTTGCCTATTGGGAAAACCGACTTTTCCAAGGAGGACCTTCTCATAAACTTAACTGCCGCAATAAACTCAGTAGAAGCAAACAAACCAGCTGGTGTTAGAGGTGTGTACTGGAGAAGTGCACACATATCGGCAATGGGACCTTCTATCAGGTTAAACATCAGAGAGATGCTGAATGGATCACAAGCTTCCATCTAA 1089 0.4362 MASLSLTSRISSSPIAMATCAPHSSLMLTPHTSSVNPQDLTPSLSSFISKPLSRNFSIFPLRLKTRGRISGKWIDVKLQKEANSRVSLVVVASLATEVELRDDRSATNTITKSKPKKGKAAFPLKTDRMRCKRLLEIERLRENIKEYDLKTAISLLKQTENKKIVGTVQAHFRLNLDPKHYDQQLRATVNLPKGTGKPVKVAVLTQGEQVNEAKEAGADLVGGEDLIEQIKGGFMEFDKLIASLDMMPKVASLGEILEPRGLMPDPIAGTVTAYIPQAIAEFKQEKVEYRADKTGIVHLPIGKTDFSKEDLLINLTAAINSVEANKPAGVRGVYWRSAHISAMGPSIRLNIREMLNGSQASI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2016 362 Pfam Ribosomal protein L1p/L10e family 156 341 IPR028364 -
Acco08g2016 362 SUPERFAMILY Ribosomal protein L1 145 351 IPR023674 -
Acco08g2016 362 FunFam 50S ribosomal protein L1 194 285 - -
Acco08g2016 362 NCBIfam 50S ribosomal protein L1 131 353 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Acco08g2016 362 CDD Ribosomal_L1 149 349 IPR028364 -
Acco08g2016 362 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 111 356 - -
Acco08g2016 362 Gene3D - 194 285 IPR016095 -
Acco08g2016 362 Hamap 50S ribosomal protein L1 [rplA]. 127 354 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Acco08g2016 362 Gene3D - 147 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2016 Acco-ChrAcco08 34500930 34505793 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g2016 08 34500930 34505793 Acco08g2016 08 34500930 34505793 ECH