Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1411 ATGGCATCAAAATCATTCAAGGCAAGCCGATCATCTCTATCAACAAGTTCTGATGCGCCTGATGGCCAGAAGCCTCCTCTGCCTCCAACTGTAACTTTTGGCCGGAGAACTTCATCTGGTCGATACATCAGTTACTCTAGGGATGATCTTGACAGTGAGCTAGGTAGTAGTGATTTCATGAATTATACAGTGCATATACCACCAACCCCAGATAACCAACCTATGGATCCATCAATCTCACAGAAAGTTGAGGAGCAATATGTATCAAACTCTCTTTTCACCGGTGGGTTCAATAGTGTTACACGAGCCCATCTAATGGACAAAGTGATAGAATCTGAAGCAAACCACCCACAGATGGCTGGTGCAAAAGGATCTTCCTGTGCAATTCCTGGTTGTGATTCAAAGGTGATGAGTGACGAACGTGGTGTTGATATCCTTCCTTGTGAGTGTGATTTCAAGATATGTAGAGATTGTTATATAGATGCTGTTAAAACAGGAGGTGGGTTATGCCCAGGATGCAAGGAGCCATATAAGAACACTGACTTGGATGAAGAGGCTGTGGGTAATGTGAGGCCTCTTCCCCTTCCTCCTCCAAGTGGAATGTCTAAAATGGAGAGGAGATTGTCCTTAATGAAATCAACTAAGTCAGCACTAATGAGGAGCCAAACTGGAGACTTTGATCACAATCGGTGGCTGTTTGAAACAAGGGGCACCTATGGCTATGGAAATGCTATATGGCCAAAGGAAGGAGGACTCGGAAATGGAAAAGAGGATGATGTTGCTGAGCCAACTGAATTCATGAATAGACCTTGGAGGCCACTTACGAGGAAACTGAAAATACCTGCTGCTATTTTGAGTCCATATCGTCTTCTTATTTTAATTCGCATGGCTGTTCTGGGCTTGTTCTTAGCATGGAGGGTCAAACATCCAAATAATGACGCAATCTGGCTATGGGGCATGTCTGTTGTCTGTGAGATATGGTTTGCTTTTTCTTGGCTTCTGGATCAACTGCCCAAGCTGTGCCCAGTTAATCGCGCCACAGATCTTAATGTCTTGAAGGAAAAATTTGAGACACCTACCCCTAACAATCCGACTGGAAAGTCCGATCTCCCAGGAATAGATATCTTTGTTTCTACTGCTGATCCTGAAAAAGAGCCACCACTCGTCACTGCAAATACCATCTTGTCTATTTTAGCTGCAGATTTTCCTGTTGAGAAGCTTTCTTGTTATGTGTCTGATGATGGAGGCGCACTTCTAACTTTTGAGGCTATGGCTGAAGCTGCAAGCTTTGCTAATATATGGGTACCCTTCTGTCGTAAGCATGGTATAGAGCCTAGGAATCCTGAGTCATATTTCAATTTGAAGAGAGATCCTTATAAGGACAAAGTGCGGCCAGATTTTGTCAAGGATCGTAGACGGGTGAAGCGTGAGTATGATGAGTTCAAGGTCAGAATCAATAGTCTTCCTGAGTCTATCCGTCGGCGATCAGATGCCTATCATGCAAGAGAGGAAATTAAGGCCATGAAACTTCAAAGACAAAATAGGGAAGATGAACCTGTTGAAAGTGTAAAGATTCCAAAAGCAACATGGATGGCTGATGGAACTCATTGGCCTGGGACTTGGTTAAGTTCTGCACCTGAGCACTCTAGGGGTGATCATGCTGGTATAATTCAGGTGATGTTGAAACCTCCCAGTGATGACCCTCTTCTTGGAGGTGCTGATGATACAAAGCTCATTGACCTGACTGATGTTGATATCCGTTTGCCCCTTCTTGTTTATGTTTCTCGTGAGAAGCGTCCAGGTTATGATCACAACAAAAAAGCAGGGGCTATGAATGCCTTAGTTCGGGCTTCTGCTATAATGTCTAATGGCCCCTTTATACTCAATCTTGACTGTGATCATTATATCTACAACTCAAAGGCAATGAGGGAAGGCATGTGCTTTATGATGGATCGTGGAGGTGATCGCATTTGTTATGTCCAGTTCCCACAAAGGTTTGAGGGGATTGATCCCTCTGATCGATATGCTAATCACAACACAGTTTTCTTTGATGTCAATATGAGAGCTCTTGATGGACTTCAAGGTCCAGTCTATGTGGGAACTGGGTGTCTTTTTAGACGAGTTGCCCTTTATGGTTTTGACCCACCTCGTGCAAAAGAAAACCACCCAGGATGTTGTAGTTGCTGCTTTGGCCGTCGCAAGAAGCAGGCCTCCATGTCAAACAACCATGAAGAGAATCGGGCATTAAGGATGGGCGATTCTGATGATGAAGAGATGGATCTTTCAACATTCCCTAAGAAATTTGGAAACTCAACTTTCCTCATTGACTCTATTCCAGTTGCAGAGTTCCAAGGCCGGCCTCTTGCTGATCACCCTGCTGTGAAAAATGGTCGCCCACCCGGTGCTCTCACCATCCCTCGTGATCTTCTTGATGCATCGACAGTGGCAGAAGCAATCAGTGTCATCTCATGTTGGTATGAGGACAAAACTGAGTGGGGAAATCGTGTTGGATGGATCTATGGATCTGTTACTGAAGATGTGGTTACTGGATATAGGATGCACAATAGGGGATGGAAATCTGTATATTGTGTGACCAAGCGTGATGCCTTCCGCGGAACTGCACCAATCAATCTCACAGACAGGTTGCATCAGGTCCTACGATGGGCTACTGGCTCTGTTGAGATTTTCTTCTCTCGAAACAATGCCCTTCTGGCTAGCCCAAGAATGAAGATTCTTCAACGAATTGCATACCTAAATGTCGGCATTTACCCATTCACTTCCATATTCCTCATTGTCTATTGTTTCCTTCCTGCACTTTCCCTCTTCTCAGGCCAATTCATTGTTCAGTCCCTCAGCGTTACATTCCTTACTTATCTCTTGACCATCACTGTGACTTTGTGCATGCTTGCTATCCTTGAGATTAAGTGGTCTGGTATCGAGCTCGAAGAATGGTGGAGAAATGAGCAATTTTGGTTGATTGGAGGCACCAGTGCCCATCTTGCTGCTGTGCTTCAAGGTTTGCTGAAAGTCATAGCAGGGATCGAAATCTCCTTCACATTGACTTCAAAATCTGGAGGTGATGATGTTGATGATGAGTTTGCTGATCTCTATATTGTCAAATGGTCATCCTTGATGATACCACCCATCACAATCATGATGGTCAACTTAATAGCGATAGCGGTCGGGGTTAGCCGAACCATATACAGTGTCTTACCGCAGTGGAGCCGTCTGCTTGGCGGTGTCTTCTTCAGCTTCTGGGTCTTAGCTCATCTGTATCCATTTGCAAAAGGTTTGATGGGAAGAAGAGGAAGGACTCCAACCATTGTGTTTGTATGGTCAGGTCTGTTAGCAATCACTATATCTCTCCTATGGGTTGCAATCAATCCTCCGGCTGGTGCTACCCAAATAGGTGGATCATTTCAGTTTCCGTAA 3432 0.4458 MASKSFKASRSSLSTSSDAPDGQKPPLPPTVTFGRRTSSGRYISYSRDDLDSELGSSDFMNYTVHIPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEANHPQMAGAKGSSCAIPGCDSKVMSDERGVDILPCECDFKICRDCYIDAVKTGGGLCPGCKEPYKNTDLDEEAVGNVRPLPLPPPSGMSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETRGTYGYGNAIWPKEGGLGNGKEDDVAEPTEFMNRPWRPLTRKLKIPAAILSPYRLLILIRMAVLGLFLAWRVKHPNNDAIWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRATDLNVLKEKFETPTPNNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADFPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHGIEPRNPESYFNLKRDPYKDKVRPDFVKDRRRVKREYDEFKVRINSLPESIRRRSDAYHAREEIKAMKLQRQNREDEPVESVKIPKATWMADGTHWPGTWLSSAPEHSRGDHAGIIQVMLKPPSDDPLLGGADDTKLIDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRAKENHPGCCSCCFGRRKKQASMSNNHEENRALRMGDSDDEEMDLSTFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGNRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQSLSVTFLTYLLTITVTLCMLAILEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWSSLMIPPITIMMVNLIAIAVGVSRTIYSVLPQWSRLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINPPAGATQIGGSFQFP 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1411 1143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 190 IPR013083 -
Acco08g1411 1143 MobiDBLite consensus disorder prediction 1 21 - -
Acco08g1411 1143 FunFam cellulose synthase-like protein D3 578 715 - -
Acco08g1411 1143 SUPERFAMILY RING/U-box 112 182 - -
Acco08g1411 1143 MobiDBLite consensus disorder prediction 1 38 - -
Acco08g1411 1143 Pfam Cellulose synthase 373 1133 IPR005150 GO:0016020|GO:0016760|GO:0030244
Acco08g1411 1143 FunFam Cellulose synthase-like protein D3 110 191 - -
Acco08g1411 1143 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 582 714 IPR029044 -
Acco08g1411 1143 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 272 1113 - -
Acco08g1411 1143 Pfam RING/Ubox like zinc-binding domain 129 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1411 Acco-ChrAcco08 16787277 16791233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1411 1 1143 Glycosyltransferase AT3G03050 84.622 0.0 2036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g1411 08 16787277 16791233 Acco08g1411 08 16787277 16791233 ECH