Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0901 ATGGCTTCCAACGGCCAAAACCACTATGTTCTAACGTTGTTGTTGTTCGTTCTCACATTCTGGAGTTGTGGGGCTGTGTCACGGAAGGTTCAAGAATCTTCTTCGTTATTAGAAAGACATGAGCAATGGATGGCCAAGTACGGTAAAGTGTACGAGGATGTTGCAGAAAAGCAAAAACGCTTTGAGATATTCAAGAACAATGTTCAGTTCATTGAGTCCTTCAATTCTAATGGCACCAAACCCTACAAGCTCAGCGTCAACCAGTTTGCAGATCAAACCAATGAAGAGTTCAAGGCCACTCGTAATGGCTTGAAGAAGAAGTCTCATGAATCACCTAGGTTGACCGTGTCGTCGTCTTCGTCTGTGACGGAGGAGACGTCGTCGCCGTTTAGGTACGAGCATGTCACTACTCTTCCTGCTTTTGTGGATTGGACGCAGAAAGGAGCTGTCACTCCCGTCAAGAACCAAGGCCAATGTGGAAGTTGCTGGGCATTTGGATTGCTTTTAACTCTCTTTCTGTTCGAAGTCGAATCGGAAATGGCTCATTTACTTTCTCCAGTTTACACTGAGGCTCTCAAAATCCACAATCCTGTACTGAATCTTAGTTCTCCATCTTCATGGCGGCTTCTCGCTAGGACTTCCAGTCATTGTAAGTTTGGAAATGATTCTGCAAAGAGAAGATGTTTTGGCAGGGTTAAGGTTGCTGCTGAGGACTCTGCTTCTAGTACTCTCACTGATTTTATTGCAGATGACTATTACGCTGTTCTTGGCCTGCTTCCAGATGCCACGCCGGAGCAGATTAAGAAGGCTTACTACAATTGTATGAAGGCTTGCCATCCAGACTTGAGTGGCGATAATCCTGAGACAACAAACTTTTGCATGTTCATCAATGAAGTGTATGAGGTACTCAGTGATCCTGTTCAACGCATGGTTTATGATGAAATTCATGGGTATTCTTTGACTTCAATCAATCCTTTCTTGGATGATTCTTGTCCAAAAGATCAAGTTTTTGTTGACGAGTTCAGCTGCATAGGTTGCAAAAATTGCGCCAATGTGGCCTCTGATGTGTTTGCAATAGAGGAAGACTATGGAAGAGCCAGAGCAAATAGCCAGTGTGGGAAAACTGAATTAGTTCAACAAGCAATTGATAGTTGCCCTGTTGACTGCATTCATTGGACATCTGCGGCACAACTATCATTACTTGAAGATGAAATGCGACGGGTGGAAAGAGTCAATGTTGCCTTCATGCTTTCAGGAATGGGATCATCATCAATGGATGTTTTTAGAATGGCAAGCTCCAGATGGGAAAAGAGGCAGACAAAAGTCTTGGAACAAGCAAAAAGGAGAATGATGAAGCAGAATGGTTCTGACAAGACAAATTCTTACTGGGACAACCTTTGGGGCAAAGCAAAAGACTACAAAAATTCAGAGGAGGAAGTGAAAGAGAGAGAAAAGAAAGCTGCCGCAGCAGCACGAAGATGGAGGGAGTACTCAAGGAGGGGTGTTGACAAGCCTCCGACATTCAAACTTCCAGAGGCAGCCTCTGGCAAGGACAACTGA 1560 0.4423 MASNGQNHYVLTLLLFVLTFWSCGAVSRKVQESSSLLERHEQWMAKYGKVYEDVAEKQKRFEIFKNNVQFIESFNSNGTKPYKLSVNQFADQTNEEFKATRNGLKKKSHESPRLTVSSSSSVTEETSSPFRYEHVTTLPAFVDWTQKGAVTPVKNQGQCGSCWAFGLLLTLFLFEVESEMAHLLSPVYTEALKIHNPVLNLSSPSSWRLLARTSSHCKFGNDSAKRRCFGRVKVAAEDSASSTLTDFIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDNPETTNFCMFINEVYEVLSDPVQRMVYDEIHGYSLTSINPFLDDSCPKDQVFVDEFSCIGCKNCANVASDVFAIEEDYGRARANSQCGKTELVQQAIDSCPVDCIHWTSAAQLSLLEDEMRRVERVNVAFMLSGMGSSSMDVFRMASSRWEKRQTKVLEQAKRRMMKQNGSDKTNSYWDNLWGKAKDYKNSEEEVKEREKKAAAAARRWREYSRRGVDKPPTFKLPEAASGKDN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0901 519 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 334 362 IPR017896 -
Acco08g0901 519 PANTHER OS01G0730500 PROTEIN 180 500 - -
Acco08g0901 519 MobiDBLite consensus disorder prediction 491 519 - -
Acco08g0901 519 CDD DnaJ 251 305 IPR001623 -
Acco08g0901 519 Pfam Papain family cysteine protease 138 166 IPR000668 GO:0006508|GO:0008234
Acco08g0901 519 Gene3D - 334 394 - -
Acco08g0901 519 Pfam 4Fe-4S single cluster domain of Ferredoxin I 338 392 - -
Acco08g0901 519 SUPERFAMILY Cysteine proteinases 36 167 IPR038765 -
Acco08g0901 519 SUPERFAMILY 4Fe-4S ferredoxins 336 392 - -
Acco08g0901 519 Gene3D DnaJ domain 235 324 IPR036869 -
Acco08g0901 519 PRINTS DnaJ domain signature 288 308 IPR001623 -
Acco08g0901 519 PRINTS DnaJ domain signature 253 271 IPR001623 -
Acco08g0901 519 PRINTS DnaJ domain signature 271 286 IPR001623 -
Acco08g0901 519 Coils Coil 473 493 - -
Acco08g0901 519 SMART Inhibitor_I29_2 40 97 IPR013201 -
Acco08g0901 519 Pfam Cathepsin propeptide inhibitor domain (I29) 40 97 IPR013201 -
Acco08g0901 519 SUPERFAMILY Chaperone J-domain 251 341 IPR036869 -
Acco08g0901 519 Gene3D Cysteine proteinases 23 174 - -
Acco08g0901 519 MobiDBLite consensus disorder prediction 100 122 - -
Acco08g0901 519 Pfam DnaJ domain 251 313 IPR001623 -
Acco08g0901 519 ProSiteProfiles dnaJ domain profile. 251 316 IPR001623 -
Acco08g0901 519 SMART dnaj_3 250 308 IPR001623 -
Acco08g0901 519 MobiDBLite consensus disorder prediction 491 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0901 Acco-ChrAcco08 8273104 8282103 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0901 08 8273104 8282103 Acco08g0901 08 8273104 8282103 ECH