Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0874 ATGTATATACACTATTGTATAGTACTGAAGCTTCTTGAGTTGATTGATTGTAATGGGTGCGGTGGGATCCAGAATTGTGCCGGTTTAGCTAAAAGGAAGGGGGCTATGGAGTCTATATTGGCGAGGGCATTGGAGTACACTCTCAAGTATTGGCTCAAATCCTTCTCTAGAGATCAATTCAAGTTGCAGGGTCGGACCGTGCAGCTCTCGAATCTAGATTTAAACGGGGATGCTTTGCATTCGAGTGTTGGATTGCCGCCTGCTCTGAATGTTGCGACGGCGAAAGTGGGGAAATTGGAGATCATTCTTCCTTCGGTGAGCAACGTACAAATAGAACCCATCATTGTGCAAATTGATCGACTTGATTTGGTTCTTGAGGAGAATGCTAATTTTGATGCATCTGCAAGTCCAAAGTGCGCCCCTCCATCTACTGCCTCCACGAAGGGTAGCGGATATGGTTTTGCTGATAAGATTGCAGATGGAATGACCATACAGATTCATACAGTCAACTTGTTACTTGAAACTCGTGGAGGTTCTTGCGGCCAAGGGGGATCAACTTGGGCACCACCTATGGCATCTATCACCATATGCAATCTTTTGCTCTACACCACAAACGAAGAATGGCAGGTTGTAAATCTTAAGGAAGCACGGGAGTTCTCCAGCAACAAGTACATTTATGTGTTCAAAAAACTTGAATGGGAATCTTTGTCTATTGATCTTTTGCCACATCCTGACATGTTCACGGGTTCTACTTTAGGCCGCTCTCAAGAGGGAGCGAACCAGAGAGATGATGATGGTGCCAAGAGAGTTTTTTTTGGAGGCGAGCGATTCCTAGAAGGCATATCTGGAGAGGCATATATTACAATCCAGAGAACTGAATTAAACAGTCCACTTGGACTTGAGGTTCAGTTACACATTACTGAAGCTGTGTGCCCTGCATTAAGTGAACCAGGACTACGTGCTCTGCTCCGCTTTATGACGGGTATATATGTCTGCCTAAACAGAGGAGATGTAGATTTAAAGGCTCAACAGCTGTCCACAGAAGCAGCTGGGCGCTCTCTTGTCTCTATTGTTGTGGACCACATATTTTTTTGCATTAAAGATACTGAATTCAAACTTGAGCTTTTAATGCAGTCTCTCTTCTTTTCTCGGGCTAGCATTTCTGACGATGGCGATTCTAACTTAACAAGGATTACAATTTCTGGACTATTTCTGAGGGATACCTTCTCGCGCCATCCATGTACGTTGGTGCAACCATCAATGCATGCTATGACGAGAGAAGCTTTCCATGTGCCAGAATTTGCTAGGAGCTTTTGTCCTCCAATATATCCATTGGGCGAACAAAAGTGGCAACTAATTGAGGGTACCCCTCTAATATGCCTTCATTCCCTACAGATCAAGCCTTCTCCACTTCCACCAGCCTTTGCTTCTCAAACTGTTATCGACTGTCAGCCTCTGATGATTCATCTCCAAGAAGAATCTTGCTTGAGGATTTTTTCTTTCTTAGCTGATGGTATCATTGTCAATCCCGGTGATGTTTTGCCAGATTTCTCTGTAAATTCTCTCATTTTCACACTTAAGGGACTAGATCTTACAATTCCTTTGGATGAGACGCAGATAAATATTCCTGAAAGCAACATGGACAGTGCAGTCCAAAGCTTCTTTTCTGGAGCAAGGCTTCACATCGAAAGCCTTTTGTTTTCAGATTCACCCTCTTTGAAACTAAGAATGCTGAACCTGGAGAAGGATCCCGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCATTAAGAAGTGGACTGCTAAAGCATCACACCTCTCTTTGTCTCTAGAAACATGTAAAGGAGAAACTGGGTCTCAGAATTCTCATGGATGGAGTGCTGGATTATGTAGATGTGTTGAACTGAAAGATGCTTCCGTTGAAGTAGCTATGGCAATGGCTGATGGCAGTCCATTATTAGAAGTTCCTCCACCGGGAGGTATTGTAAGGGTTGGAGTTGCATGTGAACAATTTTTAACCAACACTTCTGTTGAACAGTTATATTTTGTTCTTGATCTCTATGCTTATTTTGGGAGAGTTGGTGAGAAAATAGCAAAAGCTGGAAAAAGTAAACGACTGATAGATGCTAGGGGGAAATCTTCTAGTAGAAATCTTTTGGACAAATCTTCTAGTATAAAGCTTATGGAAAAGGTTCCTTGTGACACTGCTGCAAGTTTAGCAGTGAAAAACCTCCAACTTCGATTTCTGGAATCTTCTTTAATGAATGTTGAGGAAATGCCTCTGGTGCAGTTTATTGGAGATGATCTGTTCATTAGTGCCACTCATAGAACCCTTGGTGGTGCCATTGTTGTTTCATCCTCTTTACGATGGCAGAGTGTTGAAATAGATTGTGTGGATGCTGAGGTGCCCCTGGCACATGGAAATGGTTCAATTTTGAATTCTGTTGAAAGTATTCCCTCAATGAGTAGTAATGGATACCCTCAATTAAGAGCTGTATTTTGGATTAATAACAAAAGGAACAATCTATCAAATGGAAATGCTCTCTCATTTCCTTTTCTGGATATACGCATGGAACATGTCATTTCATTAAATGAACAAGACATAGAGTCACATAGTTTGAATGTCTCAGCTTCTATTTCTGGTGTTCGCCTTGGTGGAGGAATGAATTATACTGAAGCCCTGCTGCATCGCTTTGGAATACTAGCACCTGATGGTGGCCCTGGACTGGAACTTTCTAAAGGTCTAGAAAACATAAAATCAGGACCATTGTCTAAACTCCTTAAGACTGGACCTCTTATTGTTGATAATCCAGGAGATGATGGAAGTGCGAATGATGTTGATGGGAAGGAGTCAAACTTTTTACACTTGAAGAAGCCAGATGATGTGGATTTTGCTGTAGAATTAAGAGATTGGTTATTTGCTCTTGAAGGGGCTCAAGAGATGGCTGAAAGTTGGTGGTTCTCCAGCCATGAAGATGTATGCAGAGTTGAGAGGTGTTGGCACACAACTTTCAACAGTCTACGAGTACATGCAAAAAGCAGCCCAAAGGATGTTTCTAATGGAAGAGCACAATCGAATGGACCGCAACAATTTCCTGTACAGCTGATTACGGTTGGAGTTCAAGGGTTGGAGATCTTCAAGCCCCATATACAGAAGGACGTTCCCTCATCGATGTCAATTGGCAATGGGATTAAGCAGCCGGTTGACACAGTTGGGGGAGCTGGTCTTGAAGTTCGCTTGGTACTGTGTGAGGACAATTTTGATGATGAAATGGCTAACTGGAAAGTGGAAAACGTAAAATTCTCTGTTCAACAACCGATTGAGGTGGTTGTTACCAAGGATGAGTTTCAGCACCTTGCTTTTCTGTGCCAATCAGAAATTGACTCAATGGGTCGGATAACAGCTGGGATTATACGGCTCCTTAAGTTGGAAGGTTCTGTTGGCCAATCTGCAATGGATCAATTAAGCAACCTAGGAACTGAAGGCATAGACAAGATTTTCTTCCAGAGAGAAGGTAGCAGCCGATCTCCATTGTCAACCCCAACCAGCGAAAGTCCAAGCAGAACAAAGAAACGAACTTTAAATTTGCTTGAGGAGGCAGTCATGGATTCACAGGCCAAACTTGATGCTTTAATTACTGAAGTTGGTACTTCAGAGTCTTCCAGTCAGCACCTTAATGCAGTGAATGAAGTCCGTGAAAAGATTGAGACTATGCAGAACCTATTGATGCAATTGAGGAATCAACTTTAG 3759 0.4259 MYIHYCIVLKLLELIDCNGCGGIQNCAGLAKRKGAMESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSNLDLNGDALHSSVGLPPALNVATAKVGKLEIILPSVSNVQIEPIIVQIDRLDLVLEENANFDASASPKCAPPSTASTKGSGYGFADKIADGMTIQIHTVNLLLETRGGSCGQGGSTWAPPMASITICNLLLYTTNEEWQVVNLKEAREFSSNKYIYVFKKLEWESLSIDLLPHPDMFTGSTLGRSQEGANQRDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLEVQLHITEAVCPALSEPGLRALLRFMTGIYVCLNRGDVDLKAQQLSTEAAGRSLVSIVVDHIFFCIKDTEFKLELLMQSLFFSRASISDDGDSNLTRITISGLFLRDTFSRHPCTLVQPSMHAMTREAFHVPEFARSFCPPIYPLGEQKWQLIEGTPLICLHSLQIKPSPLPPAFASQTVIDCQPLMIHLQEESCLRIFSFLADGIIVNPGDVLPDFSVNSLIFTLKGLDLTIPLDETQINIPESNMDSAVQSFFSGARLHIESLLFSDSPSLKLRMLNLEKDPACFCLWEGQPIDASIKKWTAKASHLSLSLETCKGETGSQNSHGWSAGLCRCVELKDASVEVAMAMADGSPLLEVPPPGGIVRVGVACEQFLTNTSVEQLYFVLDLYAYFGRVGEKIAKAGKSKRLIDARGKSSSRNLLDKSSSIKLMEKVPCDTAASLAVKNLQLRFLESSLMNVEEMPLVQFIGDDLFISATHRTLGGAIVVSSSLRWQSVEIDCVDAEVPLAHGNGSILNSVESIPSMSSNGYPQLRAVFWINNKRNNLSNGNALSFPFLDIRMEHVISLNEQDIESHSLNVSASISGVRLGGGMNYTEALLHRFGILAPDGGPGLELSKGLENIKSGPLSKLLKTGPLIVDNPGDDGSANDVDGKESNFLHLKKPDDVDFAVELRDWLFALEGAQEMAESWWFSSHEDVCRVERCWHTTFNSLRVHAKSSPKDVSNGRAQSNGPQQFPVQLITVGVQGLEIFKPHIQKDVPSSMSIGNGIKQPVDTVGGAGLEVRLVLCEDNFDDEMANWKVENVKFSVQQPIEVVVTKDEFQHLAFLCQSEIDSMGRITAGIIRLLKLEGSVGQSAMDQLSNLGTEGIDKIFFQREGSSRSPLSTPTSESPSRTKKRTLNLLEEAVMDSQAKLDALITEVGTSESSSQHLNAVNEVREKIETMQNLLMQLRNQL 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0874 1252 Pfam N-terminal region of Chorein or VPS13 36 132 IPR026854 -
Acco08g0874 1252 Coils Coil 1197 1217 - -
Acco08g0874 1252 Coils Coil 1231 1251 - -
Acco08g0874 1252 PANTHER UNCHARACTERIZED 36 1250 IPR026728 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0874 08 7920360 7930537 Acco08g0874 08 7920360 7930537 ECH