Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0729 ATGATCTTGTCAGAGAGATCTAAGTACCCGAATCAGAGCAAAAAGGGTGTCTTGGAATCTCTCCAATCTCCTAAATCTCGCTGTTCTTCGCCGTCCTGTATATACAGAAGAATGGTGGCCGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGTTTCCTGTGTGGTTTTCATATACATGTCTTTTGGAGACTTGAGGCCGAGTTCAAGAGAAGAAGCGACATTGTCTTTTGTTAAGAGAAATGAGACTCAGTTAATGTTAGATGGCAGACCTTTCTACATCAATGGTTGGAACTCTTACTGGTTTATGGTTCAGTCGGTGGACGAATCTTCCAGACCCAGGGTTCGTGCGATGCTTCAAGCTGGTGCGAAGATGGGTCTCACTGTTTGTAGAACTTGGGCTTTTAATGATGGCGACTACAATGCCCTTCAGATTTCCCCTGGTCGGTTCGATGAGCGAGTTTTCCAGGCCTTGGATTATGTCATAGCAGAAGCAAGGCAACAAGGAATCCGGCTGCTGCTTGCCTTGGTCAATAACTTGCATGCCTATGGTGGGAAGACCCAGTATGTGAAATGGGCATGGGAAGAAGGGATTGGGTTAAGCTCATCAAATGATTCTTTCTTTTATGATCCATCAATCCGCAGTTATTTCAAGAATTATGTCAAGACTGTTCTGACAAGGAAGAATACCATCACTGGAGTTGAATATAGAAATGATCCCACTATATTGGGCTGGGAATTAATTAATGAACCTCGTTGCATGACCGATCCATCTGGTGACACTCTCCAAGACTGGCTTGAAGAAATGTCTGCTTTTGTCAAATTGATAGACAAGAATCATTTGGTGACTATTGGACTTGAAGGATTTTATGGTCCCAACGACCCAAAAGGCCATACTGTGAACCCAGAGGAGTGGGCATCCAGGCTTGGATCTGACTTTATTCGCAATTCTGGGATTGCCAATATTGATTTCACCTCCGTTCATATCTATCCTGACCACTGGTTAAAAACGTATGACTTTGAAGTGAACCTGCGTTTTGTCACCAAGTGGATGCATTCACACATTGAAGATGGCGGCAAAGTATTGAAGAAGCCTGTTTTGTTCTCTGAATATGGATGGTCAGACTTGATCAAGAACTTTTCGGTATCAGACCGTGAAAGGATGTACAGAACAATTTTTGACATAATCTACAAATCTGCTAAGAAAAACAGGTCCGGAGCAGGTGCCTTAGTGTGGCAATTCTTAGTAGAAGGAATGAATGAGTTCGAGGATGATTTCTGGATAATCCCATGGAAAGGATCATCAACATATTCTCTATTTCTTGAGCAATCATGCAGATTGGCAAAAGTCACAGGATGGACTACTCAACAGGACAGAAGTTTCAAAGATGCATGTAAGAAAATTTGA 1407 0.4243 MILSERSKYPNQSKKGVLESLQSPKSRCSSPSCIYRRMVAGNGLFYPILGFVSCVVFIYMSFGDLRPSSREEATLSFVKRNETQLMLDGRPFYINGWNSYWFMVQSVDESSRPRVRAMLQAGAKMGLTVCRTWAFNDGDYNALQISPGRFDERVFQALDYVIAEARQQGIRLLLALVNNLHAYGGKTQYVKWAWEEGIGLSSSNDSFFYDPSIRSYFKNYVKTVLTRKNTITGVEYRNDPTILGWELINEPRCMTDPSGDTLQDWLEEMSAFVKLIDKNHLVTIGLEGFYGPNDPKGHTVNPEEWASRLGSDFIRNSGIANIDFTSVHIYPDHWLKTYDFEVNLRFVTKWMHSHIEDGGKVLKKPVLFSEYGWSDLIKNFSVSDRERMYRTIFDIIYKSAKKNRSGAGALVWQFLVEGMNEFEDDFWIIPWKGSSTYSLFLEQSCRLAKVTGWTTQQDRSFKDACKKI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0729 468 FunFam Mannan endo-1,4-beta-mannosidase 6 74 451 - -
Acco08g0729 468 Gene3D Glycosidases 74 451 - -
Acco08g0729 468 PANTHER - 46 460 IPR045053 GO:0004553
Acco08g0729 468 Pfam Cellulase (glycosyl hydrolase family 5) 89 413 IPR001547 GO:0004553|GO:0071704
Acco08g0729 468 MobiDBLite consensus disorder prediction 1 28 - -
Acco08g0729 468 SUPERFAMILY (Trans)glycosidases 76 441 IPR017853 -
Acco08g0729 468 ProSitePatterns Glycosyl hydrolases family 5 signature. 243 252 IPR018087 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0729 Acco-ChrAcco08 6424712 6428758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0729 40 452 Glycoside Hydrolase AT2G20680 69.976 0.0 625
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0729 08 6424712 6428758 Acco08g0729 08 6424712 6428758 ECH