Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0656 ATGAGGCGAAGGGCAGCTGATTTTCGTAGGCCAGTAAGAAGGAGGGTTCCGGATGTGTTATGGTGGGCATTGTTCAGCGTAGTAGTTCTTCTCTTTATTTATGTTTTGAGCAAAGGAAATCAGGTTCAGTCTAGACCCGCTTTATCCAAGAGAATGTACAAACATGATAGGATTGTGGAAGGCCTTAATATTACTGAAGAGATGTTAAACCCCAACTCAGTGACCAGACAACTGAATGACCAGATATCCTTAGCGAAGGCTTTTGTTGTCATTGCAAAAGAAAGTAACAATCTTCAATTTGCTTGGGAATTAAGTGCCCAGATTCGCAATTCAAAGATTCTGCTCTCAAAGGCTGCTACAAGGCGTGTCCCTTTAACAACCATCGAATCAGAACAGGCTATCCGTGATATGGCATTAATGCTATACCAGGCCCAGCAGCTGCATTATGACAGTGCAACAATGATCATGAGACTGAAGGCCAAAATTCAAACTCTTGAAGAACAATCGAGTTCTGTATCTGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCGAAAAGCCTTTATTGCCTTGGTGTCCGGCTGACATCTGAATGGTTCAGAAACCTTAATCTGCAAAAGAAATTGATGGAAAAGAGACAAATGGAGATGAAGCTAAAAGACAACAATCTTTACCACTTTTGTGTGTTCTCTGATAACATCATTGCTACTTCAGTAGTGGTCAATTCAACTGCAATAAACTCTAAAAATCCCGAAACGGTAGTTTTCCACATTGTCACTGATGAAATAAACTACGCTGCAATGAAGGCATGGTTTGCCATGAATGAATTCCGAGGAGTGACTGTTGAGGTTCAGAAGTTTGAAGACTTCAGCTGGTTGAATGCTTCATATGTTCCTGTTCTTAAGCAACTCCAAGACTCAGAAATACAGAACTACTACTTCTCTGGCAACAGTGATGATGGCAAGACGCCAATCAAGTTTAGGAACCCTAAATATCTCTCCATGCTTAACCATCTAAGGTTTTATATTCCTGAAGTTTTTCCTGCACTGAAGAAGGTGGTGTTTCTTGATGATGATGTTGTGGTTCAGAAGGATCTCTCCCCACTTTTCTCCATCGATTTGAATGGCAATGTTAACGGGGCTGTTGAGACATGCACGGAGACATTTCATAGATACCATAAATACCTGAATTACTCCCATCCACTTATACGAGCACATTTTGATCCTGACGCTTGCGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAGGAATGTCACAGGCATCTACCACTACTGGCAGGAAAAGAATGTTGATCGGACATTATGGAAACTCGGTACCTTACCACCTGGTCTGTTGACATTTTATGGTTTAACTGAGCCCTTGGAACCGTTTTGGCATGTATTGGGATTCGGCTACACTACTGTTGATGCTCAGTTAGTAGAAAAGGGAGCTGTACTACACTTCAATGGGAACTCCAAACCATGGTTGAAGATTGCGATTGAGAAGTACAAGCCAATGTGGGAGAAATATGTCGATTATTCTCATCCTTTATTGCAAAAATGCAACTTTCATTGA 1602 0.4114 MRRRAADFRRPVRRRVPDVLWWALFSVVVLLFIYVLSKGNQVQSRPALSKRMYKHDRIVEGLNITEEMLNPNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSKILLSKAATRRVPLTTIESEQAIRDMALMLYQAQQLHYDSATMIMRLKAKIQTLEEQSSSVSEKSSKYGQIAAEEVPKSLYCLGVRLTSEWFRNLNLQKKLMEKRQMEMKLKDNNLYHFCVFSDNIIATSVVVNSTAINSKNPETVVFHIVTDEINYAAMKAWFAMNEFRGVTVEVQKFEDFSWLNASYVPVLKQLQDSEIQNYYFSGNSDDGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSPLFSIDLNGNVNGAVETCTETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLEPFWHVLGFGYTTVDAQLVEKGAVLHFNGNSKPWLKIAIEKYKPMWEKYVDYSHPLLQKCNFH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0656 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 528 IPR029044 -
Acco08g0656 533 Pfam Glycosyl transferase family 8 235 508 IPR002495 GO:0016757
Acco08g0656 533 Coils Coil 155 175 - -
Acco08g0656 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Acco08g0656 533 CDD GT8_like_1 228 521 - -
Acco08g0656 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 65 532 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0656 Acco-ChrAcco08 5826455 5829293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0656 1 533 Glycosyltransferase AT2G20810 80.037 0.0 885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0656 08 5826455 5829293 Acco08g0656 08 5826455 5829293 ECH