Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0642 ATGGCCGCTGTTACTTCTGTGTCCTTCTCCGCATTGACCCAATGTTCTGAAAGAAAGCCTGCTTTCTCTTCCACTCGCTTCTTCGGATTCAATTCGGAGGTATTACGGTTTCGGACGAATATTTCTTACCACTATGCTGCTGTTGGAGCTTCCAGTTCCACTTCTAAAATGATTATTCCATGCATGTCTTCTGCCACAGATGTTCCCACTGTATCCGAGACAAAATATAATTTCCTCAAGGCATATAAACGACCGATCCCTAGTATCTACAACAATGTGCTGCAGGAGCTCATTGTTCAGCAGCATTTAATGAGATACAAGAGATCATACCGTTATGACCCTGTATTTGCACTTGGTTTTGTCACTGTGTATGATCAACTCATGGATGGGTATCCCAGTGATGAAGACCGAGATGCCATCTTCCAAGCATATATCAAGGCATTGAAGGAAGAGCCAGAAAAGTATAGAATAGATGCACAGAAGTTGGAAGAGTGGGCGCGGGCTCAGAATCCAAATTCCCTAGTCGAATTTTCTTCCCGAGAAGGAGAGGTTGAAGGGATATTAAAAGATATTGCAGAAAGAGCAGGCGGAAAGAGGGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCTTATTTCGACTTCTTGAGTTGGCAAATGCAACAGAACCGGCCATTTTGGATAAGCTTTGTGCAGCTTTGAACATCGACAAGAGAAGTGTTGATCGGGATTTGGATGTGTACCGTAATCTGCTTTCCAAGTTGGTCCAGGCTAAAGAGCTGCTAAGGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGACTGAATCTCAAAAGGCTAATGAGGCCATTTCAACATGTTCGGGACAGGGTATCAATTCTCTGGCCTCTAGACATTAA 903 0.433 MAAVTSVSFSALTQCSERKPAFSSTRFFGFNSEVLRFRTNISYHYAAVGASSSTSKMIIPCMSSATDVPTVSETKYNFLKAYKRPIPSIYNNVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMDGYPSDEDRDAIFQAYIKALKEEPEKYRIDAQKLEEWARAQNPNSLVEFSSREGEVEGILKDIAERAGGKRDFSYSRFFAVGLFRLLELANATEPAILDKLCAALNIDKRSVDRDLDVYRNLLSKLVQAKELLREYVDREKKKREERTESQKANEAISTCSGQGINSLASRH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0642 300 NCBIfam photosystem II biogenesis protein Psp29 67 272 IPR017499 GO:0010207|GO:0015979
Acco08g0642 300 Coils Coil 247 277 - -
Acco08g0642 300 Pfam Thylakoid formation protein 70 275 IPR017499 GO:0010207|GO:0015979
Acco08g0642 300 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Acco08g0642 300 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 292 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0642 Acco-ChrAcco08 5749860 5753086 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3523 01 51879261 51881403 Acco08g0642 08 5749860 5753086 CCT
Acco08g0642 08 5749860 5753086 Acco08g0642 08 5749860 5753086 ECH