Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0553 ATGGATTACGGACACAAGGTGCGAGTGGCGTTTGCGATCGCTTCTTTGGCGTTGGTGTCAATCTACTTTACTGCTCGGTACCGGAGTCGGCGTAAGCAGAAGTACCCACCGAGTTTGTGTTACTTACATACCGACCCAAAGCCACAGTATGCTTTTAAACGAGTATTAGCTGATAACTCGTACACTGTGTTCAAGCACTTGAAGCTCAACGCCTCCGGTGGTGATAGGCCTTCAAATTCCCATCCCTTTGAGGCAGAGATTACAGCACTACTTAAAGACCCTCAGCCTCAATTAGAATTCAGTACTGAGATTGAGGAACTGAAGAAGAAAGATACATATGTTTGGATTGATACAGAGTTTCAACTAAAGGAGCTTGTCAATGTATTAGATAAAGAGAGGTTCTTTGCTGTGGACACAGAACAACACACTTTGCGATCTTTTCTTGGCTTTACAGCATTAGTTCAGATTTCTACTCAGCAGGAGGATTATTTGATTGACACAATTGCCTTGCATGATTTAATGGGAATTCTTCGCCCAGTTTTTGCAAATCCTTTAATTTGTAAAGTGTTTCATGGAGCTGACAATGATGTTGTCTGGCTACAAAGAGATTTTCATATCTACGTTGTTAATCTATTTGATACGTCAAAGGCATGCGAGGTTCTGTCAAAGCCACAGAAATCGCTTGCATATCTACTTGAAACTTATTGTGGAGTTACAACAAATAAATTGTATCAGCGTGAAGACTGGAGACAACGTCCCCTCTCAGCAGCCATGATACAATACGCACAAACAGACGCACACTATTTGTTACATATTGCAAATTGTTTGATCACTGAGCTCAAACAACTGGACGATGAAAACTCTGGTTCCAATGACAAATTTCATTTTCTTCGTGAGGCTAGTCGACGTTCCAACATGACTTGTTTGCAACTTTTCACAAAAGATATTGAAGCTTCTCCTGGAGAATCTGCTGCATTTTCATTATTTTCAGGATATGTGGGTGGTGAGAGTTCTTCAATTTCCAGTGAAACCCAGTTTCAGAATTTTGTGAGGCGACTATGTGCATGGAGAGATCTGATGGCTCGCATCCATGATGAGAGCTTGAAATATGTATTATCGGACCAGTCAATTGTTGCTTTGGCTAATCAGCCTCCAACGAGTGGCTCTAAAATAAGCAGTATCATAGCTCAGGCTGATATCAATATAGAAATGGGTGCCAATTCTTTCTTTTCTCCTCCATCTCCTATTGTTGTCAGCCACCTAAGCGATGTCTATGATTTGCTTACAGACAATTTAGGTAAAACTGAAGATATTTATTCAGCAATTCTTCAGAAGTGCCTTGGTCCCAATGGGAGTTGTCCAATTTCTCTATTTAATTATTGTTTGTTGGTTAGCAGTAATCTGAGACCTATGATAGCCTATAAACACCTTAGTGTAAGAAATTCGAAAAAAGTTTCTCGGAAGGCCTCTCGAGATTTGTTTGTTCAGAAATTCTCTTGTAAATCTCCTGTTTATCACAATTATCGGATTTATGCTAATGATGGGCGGCTGCTTTGTTACTGTGATCGGAGGAAGCTTGAATGGTACCTCAATCGGGATCTGGCAAAACTAATTGATGAAGATCCACCTGCCATAATGCTTCTTTTTGAACCAAAAGGTCGCCCAGAGGATGAAGACAATGATTTCTATATCCAGAGCAAGAAAAACATTTGTGTTGGCTGCGGTGAAGGAAATCACTACTTGCGGTACCGGATAATCCCATCGTGCTATAGAATACATTTTCCTGAGCATTTGAAAAGCCATCGTTCTCATGATATTGTCCTGCTTTGTGTGGACTGTCATGAAGTTGCTCATGCTGCTGCAGAGAAATACAAGAGAAAGATAGCAGCTGAATTTGGGATTCCTCTCTTTGTTCAGAGTGTAATTGATCCAGGACAAGCATCTGATGCGACCTTTGAAGAGGGAGGTGTTTCTCCCTTACAGTTGCGAACAGCAGCCATGGCTCTTCTGCGCCATGGACCAAGAATGCCTCCCAGTCGCCATGATGAACTGACTGAGATTGTGAAGAGGTACTATGGAGGAAGGGGGATATCTGAGGAAGATTTGGAGAGAGCATTGCTAGTTGGCATGAGTCCACATGAGATAAGGCGATTTGAGAAGAAAAGAGGATATTCATTTAAACATTTAGTAAGAGGTGCTGCTGGGAAGATAGTACAGGAAAATCATGGTGATTGCACACCCACAATGGGAGTTGTGGGCACATCAAATTTTAATGCTCTAGATGGTTCATCTGGAAATAAAGCAACAAGCAACGGAGTAGTTAGAGAACTTACTATGGTAAAGGATGTTGTTGGAAACCCCACTATATCTTCTGATTCAGGAGTCAATGGAGCTTTCTCTGTTATTTTAACTCATGTGAACACAGAAAAAAATTCTGGTTCTAACGAGTTAAGTGCCTCTGTTATAAATCCTGATGATAGCTGTCTAGGAGGAGGGGCTCCAAATGGAATTGATGACTTATTCCCTAGAGATGTAGAGTCTGCACAAGCGAAACACAATTCAAAACTATCACTCTTGGGACATGGACCACATGGAAAGCAAGTTGTTGAACATTTAATGAAGGAATACGGCGAGGATGGCATTTGCCAGTTTTGCCAAAGATGGAGACAAGTTTTTGTTGAAGCTGTCAAACCACGGTTTCTACCTGCTGGCTGGGACATAAATCACAGTGGCAGAAGGGATTTCGGAGAATTCAGTGTCTACAATCCGCTCCGACAGGCATCTGCTGCTGCTGCTAGCAAGTAA 2805 0.4164 MDYGHKVRVAFAIASLALVSIYFTARYRSRRKQKYPPSLCYLHTDPKPQYAFKRVLADNSYTVFKHLKLNASGGDRPSNSHPFEAEITALLKDPQPQLEFSTEIEELKKKDTYVWIDTEFQLKELVNVLDKERFFAVDTEQHTLRSFLGFTALVQISTQQEDYLIDTIALHDLMGILRPVFANPLICKVFHGADNDVVWLQRDFHIYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVTTNKLYQREDWRQRPLSAAMIQYAQTDAHYLLHIANCLITELKQLDDENSGSNDKFHFLREASRRSNMTCLQLFTKDIEASPGESAAFSLFSGYVGGESSSISSETQFQNFVRRLCAWRDLMARIHDESLKYVLSDQSIVALANQPPTSGSKISSIIAQADINIEMGANSFFSPPSPIVVSHLSDVYDLLTDNLGKTEDIYSAILQKCLGPNGSCPISLFNYCLLVSSNLRPMIAYKHLSVRNSKKVSRKASRDLFVQKFSCKSPVYHNYRIYANDGRLLCYCDRRKLEWYLNRDLAKLIDEDPPAIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRKIAAEFGIPLFVQSVIDPGQASDATFEEGGVSPLQLRTAAMALLRHGPRMPPSRHDELTEIVKRYYGGRGISEEDLERALLVGMSPHEIRRFEKKRGYSFKHLVRGAAGKIVQENHGDCTPTMGVVGTSNFNALDGSSGNKATSNGVVRELTMVKDVVGNPTISSDSGVNGAFSVILTHVNTEKNSGSNELSASVINPDDSCLGGGAPNGIDDLFPRDVESAQAKHNSKLSLLGHGPHGKQVVEHLMKEYGEDGICQFCQRWRQVFVEAVKPRFLPAGWDINHSGRRDFGEFSVYNPLRQASAAAASK 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0553 934 FunFam Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain 46 318 - -
Acco08g0553 934 Pfam 3'-5' exonuclease 113 280 IPR002562 GO:0003676|GO:0006139|GO:0008408
Acco08g0553 934 Pfam HRDC domain 348 394 IPR002121 GO:0003676
Acco08g0553 934 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 41 923 IPR045092 GO:0000175|GO:0000467
Acco08g0553 934 Gene3D - 45 318 IPR036397 GO:0003676
Acco08g0553 934 SUPERFAMILY Ribonuclease H-like 47 309 IPR012337 -
Acco08g0553 934 SUPERFAMILY HRDC-like 346 395 IPR010997 GO:0000166|GO:0044237
Acco08g0553 934 Gene3D HRDC domain 336 438 IPR044876 -
Acco08g0553 934 ProSiteProfiles HRDC domain profile. 343 423 IPR002121 GO:0003676
Acco08g0553 934 SMART 35exoneu6 113 281 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0553 Acco-ChrAcco08 4456523 4464056 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0553 08 4456523 4464056 Acco08g0553 08 4456523 4464056 ECH