Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0456 ATGATTATGGCGTCACGAATAGCTCGCGAGCGTCAACTGCTCGTTGAGTCCGTGTACTCTGTCATTGCACTTCTCTTCCTCCTCGTTACTTGCGTTGAGCTCTGCGACGCCGCCTCCGTAGTCGATGTTTACCGCCTGATTCAGTATGATATGTCTGGGGCTCCGTTTGGATCTCGACTCGCCAGCCTCAATCACCATGCCGGCTCCCTCCACTTCTCTCCCCATACTGATCTCTCACGCACTGTGCTCGTGATCCCGCTTCGCGAGTTGAACATAACTTTTGTCAAAGAATATATCGTTGAAAAGAAGCCACTGGGGGGCTTATTATTTTTGCTGCCTAAGATGTTCAGTGTAGAAAATGAAGGTGGGGTGAGAACTGATCATCAAGATGATGGCAAGGAGCAGCTGAAGAATGTGTTGGCTGAACTTGAACAGATACTAGTACACAATAACTTACCTTACCCTGTTTATTTTGCTTATGAGGATGACAACATTCATGATGTGTTAGCTGATATAAAGAAAAATGATGCTACTGGCCAACCTGCTACTGCAAGTAATGGCGGATACAAGTTTGTTGTTTCAGCTCCAGAGCCAAAGAAAGTCGCTTCCCCCACAATTACAAATATTCAGGGATGGTTGGCTGGAAAGAAGACGGATGATGATGCTAGTCAATTACCCACCATTGCTATAGTGGCATCATACGACACTTTTGGGGCTGCTCCTGCATTGTCAGTGGGAAGTGATAGTAATGGAAGTGGTGTTGTGGCTCTCCTTGAAGTGGCTAGGTTGTTTTCTCTCCTCTATTCAAATCCGAAGACAAGAGGACATTACAATCTACTATTCGGACTGACATCTGCTGGGCCGTACAACTATAATGGAACTCGTAAGTGGCTTCGCAGCTTCGATCAACGTATGCGTGAAAGCATTGACTATGCTATCTGCTTGAATAGTATTGGCTCATGGGAAAAAGATTTGTGGATTCATGTGTCTAAGCCTGCAGAAAATGTCTATATAAAGCAAATTTTTGAAGATTTTTCTAGCGTGGCAGAAGAGTTGGGTTTTACTGTCAATCTGAAGCACAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTCTCTAGGCTGAGAGTTACTGCTGCCACCCTCTCTGAACTCTCCACCGCACCTGACTTGCTAGAGAGGACTGGGGGCCTTGTTGACAGCAGGCATTTTGTCAATGAAACAGCAGTTGTCAGAAGTGTGAAGTTAATTGCTGAGAGTCTTGCGAGGCATATTTACAGACATCAAGGAAAGAACATTCGGGTATTTGCGGACGACAGTAGTTTGGCTGTAAATCCTTCCTATATTCGATCATGGTTAAATGTTCTGTCCCGAACACCTCGGGTGGCACCATTTCTGCCAAAAGATGATCCTTTTGTCACAGCACTGAAAAAGGAATTAGAAGATCACACTGACCAGGTTGATCTGCAACGAGATGTGCTAGATGGGATGTTCACTTTCTATGATTCCACTAGGGCAATGCTAAACGTATATCAGGTCGCCAGTGTCACATTTGACCTTCTGTTGCTGTTAGTATTGGGATCATATTTAATTTTGCTCTTCAGCTTCTTGGTCATCACAACTAGGGGCCTTGATGATCTAATCAGCTTATTTCGACGGCCTCCCTCACGAAAAGTGAAGACTGCATAG 1704 0.4466 MIMASRIARERQLLVESVYSVIALLFLLVTCVELCDAASVVDVYRLIQYDMSGAPFGSRLASLNHHAGSLHFSPHTDLSRTVLVIPLRELNITFVKEYIVEKKPLGGLLFLLPKMFSVENEGGVRTDHQDDGKEQLKNVLAELEQILVHNNLPYPVYFAYEDDNIHDVLADIKKNDATGQPATASNGGYKFVVSAPEPKKVASPTITNIQGWLAGKKTDDDASQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGHYNLLFGLTSAGPYNYNGTRKWLRSFDQRMRESIDYAICLNSIGSWEKDLWIHVSKPAENVYIKQIFEDFSSVAEELGFTVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPDLLERTGGLVDSRHFVNETAVVRSVKLIAESLARHIYRHQGKNIRVFADDSSLAVNPSYIRSWLNVLSRTPRVAPFLPKDDPFVTALKKELEDHTDQVDLQRDVLDGMFTFYDSTRAMLNVYQVASVTFDLLLLLVLGSYLILLFSFLVITTRGLDDLISLFRRPPSRKVKTA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0456 567 Gene3D Zn peptidases 126 430 - -
Acco08g0456 567 SUPERFAMILY Zn-dependent exopeptidases 152 411 - -
Acco08g0456 567 CDD M28_nicalin_like 140 431 - -
Acco08g0456 567 ProSitePatterns EF-hand calcium-binding domain. 248 260 IPR018247 -
Acco08g0456 567 PANTHER NICALIN 10 567 IPR016574 GO:0009966|GO:0016020
Acco08g0456 567 Pfam Nicastrin 228 365 - -
Acco08g0456 567 PIRSF Nicalin 3 562 IPR016574 GO:0009966|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0456 9 565 EF-hand Containing Proteins AT3G44330 71.993 0.0 836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0456 08 3639144 3645246 Acco08g0456 08 3639144 3645246 ECH