Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0450 ATGACTCGGATTTTGGTTCAGCGGGGTTCGTCTGGCAATTCCTCGTCAAACCCTAGTCGTTCTTCTTCTACTCGGGCAGAGCCACTCGCAACAGTTCACCCTGCTCCTTCGACTGTAAAAGATGAGGGCAGTGGACAGGAGGTACCAGACCTAGTTGCTGACAACGAGCTTTTGGATTCTTCTGGGAAGAACGACGAACTTTTGGTAGATAATCTTCATTGTGAGCAGAATGACGCTACAAGTGACGAAATAGCTGACGTTGAGAAAGCTGGTAAGGAGGAGGTAGCGGGTAGGCGAGAATATGACAACAGATTGTGTGGATTGAAAATTTCAGAGAGACTTGCATCAGGAAACGAGGGTTCAAGCTGTGGCTCTTTGCGCAGTGCTAATGTTACTCCAAATCCACCACCTCCTCCTGTTCCTCCTCCAAAACTGTCGGCCTCTAACTTGAATTCAAAGAAAAATGTATCATCAAATTCAAATGCTGTCCAAATAGGACCATCTCGAAGAGCATCTGCGTGGCCTGTTGTTTCGGCCAGGACTTCACCTGCTGGGTCTCGACCTTCTTCTCCTAGGTCTCTTAATGAGAATGAGGGTTACAATAGCGCTGATGAACAGAATCCATGCTTTCCATCCTCTTACGATGATTTAGAGAGAGAACGGCAATTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAAAGAATGATGCAGGATGGAAACTGTCTTTTTCGTGCAGTTGCAGACCAGGTGTATGGGGACTCTGAATTGTATGATTTGGTCCGACAGATGTGCATAGACTATATGGAGCGGGAAAGAGACCACTTTTCTCAATTTATTACTGAAGGCTTCACATCTTATTGTAAGAGGAAGAGAAGAGACAAGGTCTATGGAAACAATGTTGAGATCCAATCTATGTGTGAGATGTATAATCGTCCCATTCATATATACTCCTATACTATGGAACCTATCAACATCTTTCATGGAAGCTATGACACTGATACACCACCCATACGACTGAGTTATCATCATGGGAATCATTACAATTCCCTTATTGACCCACGACGCATGACAGTTGGCGCAGGACTTGGGTTTAGCTGCCTTCGTGGGACAAATGTTGACAGAGATCAAGTCAAGGCTGCAATTAAAGCTCAACAGGACCAACAGATTGATAATGCACTTTTAGCAGAGGCACGGCTTTACTCTGATCTTGAGCTTACAGAAAAGGAGATTGAGCACATGGTGATAGAAGCTTCTCGGGCTGAATATCTCGCTGATGTCACATTTAAGCAGCAAGCTTCCCATAGAGAATCTTCAACCTCAAACGCAGAGCCTTCATCTTCTGGAGCAACAGGACCATCGGGTGGAGAAGGTAAGATGGAGATTGGGAAAGAGCAAGATTCAAATCTGAGCAATGGCATGCAGATGGTGCTATCCATGGGATTCAGCTACCTGCAGGCGATAGACGCTTATAGCATATTTGGGGATGATGTGGATTCTATGGTTTGTTACCTCTTGGAAACCAGCAGTAGCAGCAGACGAAAAGGCAAGGCCCCTGAGTGA 1569 0.4506 MTRILVQRGSSGNSSSNPSRSSSTRAEPLATVHPAPSTVKDEGSGQEVPDLVADNELLDSSGKNDELLVDNLHCEQNDATSDEIADVEKAGKEEVAGRREYDNRLCGLKISERLASGNEGSSCGSLRSANVTPNPPPPPVPPPKLSASNLNSKKNVSSNSNAVQIGPSRRASAWPVVSARTSPAGSRPSSPRSLNENEGYNSADEQNPCFPSSYDDLERERQFEIDIRRAKGYEVKRMMQDGNCLFRAVADQVYGDSELYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQSMCEMYNRPIHIYSYTMEPINIFHGSYDTDTPPIRLSYHHGNHYNSLIDPRRMTVGAGLGFSCLRGTNVDRDQVKAAIKAQQDQQIDNALLAEARLYSDLELTEKEIEHMVIEASRAEYLADVTFKQQASHRESSTSNAEPSSSGATGPSGGEGKMEIGKEQDSNLSNGMQMVLSMGFSYLQAIDAYSIFGDDVDSMVCYLLETSSSSRRKGKAPE 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0450 522 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 467 510 IPR015940 -
Acco08g0450 522 ProSiteProfiles OTU domain profile. 233 356 IPR003323 -
Acco08g0450 522 CDD OTU_plant_OTU6-like 229 355 - -
Acco08g0450 522 Gene3D - 215 366 - -
Acco08g0450 522 MobiDBLite consensus disorder prediction 1 64 - -
Acco08g0450 522 MobiDBLite consensus disorder prediction 146 167 - -
Acco08g0450 522 MobiDBLite consensus disorder prediction 433 467 - -
Acco08g0450 522 MobiDBLite consensus disorder prediction 116 213 - -
Acco08g0450 522 MobiDBLite consensus disorder prediction 182 209 - -
Acco08g0450 522 MobiDBLite consensus disorder prediction 433 455 - -
Acco08g0450 522 FunFam OTU domain-containing protein 5 214 366 - -
Acco08g0450 522 Pfam OTU-like cysteine protease 241 350 IPR003323 -
Acco08g0450 522 SUPERFAMILY Cysteine proteinases 221 356 IPR038765 -
Acco08g0450 522 MobiDBLite consensus disorder prediction 116 130 - -
Acco08g0450 522 MobiDBLite consensus disorder prediction 131 145 - -
Acco08g0450 522 MobiDBLite consensus disorder prediction 1 28 - -
Acco08g0450 522 PANTHER OTU DOMAIN CONTAINING PROTEIN 111 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0450 Acco-ChrAcco08 3571737 3575494 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0450 08 3571737 3575494 Acco08g0450 08 3571737 3575494 ECH