Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0344 ATGTCTCCTTTCTTCTCTTTTCTCCTACTTCCTCTCATAATTTCTTCAAGTAGTGCTCAGGGTCCACCATCACCAGACTACTTGCCAGGTTCCAAAATTAGCACTCTTAGCTTTGATCGAGGATTCAGAAATCTCTGGGGTCCTCAGCACCAGAGACTAGACCAGGGCTCATTAACAATCTGGCTTGACTCTGACTCAGGGAGTGGATTCAAGTCACTGCAGTCTTATCGATCTGGGTACTTTGGTGCTGCAATTAAGCTTCAACCAGGTTATACAGCAGGAGTCATTACATCATTCTATTTATCAAACAACCAAGACCACCCAGGAAACCATGATGAAATTGATCTCGAGTTCCTTGGCACTACACCAGATAAGCCCTATGTGTTACAGACAAACGTATATATCAGAGGCAGTGGAGATGGAAATATCATAGGCAGAGAAATGAGGTTTCATCTTTGGTTCGACCCAACAGAAGATTTTCACAACTACGCTATTCTGTGGAAACCCAGTGAGATCATATTCCTAGTTGATGATGTCCCCATAAGGAAGTATCCTAGGAAGAGTGATGCCACATACCCTACAAGAACAATGTATGTGTACGGATCAATATGGGATGCTTCGTCCTGGGCCACAGAGGAAGGAAAATACAAAGCTGATTATAAATACCAACCATTCGTTGGTAGGTACAAGAACTTCAAGCTCAAAGGTTGCACCACTAATAGCCCTGCCTCGTGCCAACCGCCCTCTGCTTCACCTTCTGGCCATGCCAGTCTCACACCTCAGCAATATGCCGCCATGCAATGGGTCCAAAACAACTATTTGGTCTATGACTATTGCCATGACACTAAGAGAGATCACACTCTCACTCCAGAGTGCTAG 879 0.4471 MSPFFSFLLLPLIISSSSAQGPPSPDYLPGSKISTLSFDRGFRNLWGPQHQRLDQGSLTIWLDSDSGSGFKSLQSYRSGYFGAAIKLQPGYTAGVITSFYLSNNQDHPGNHDEIDLEFLGTTPDKPYVLQTNVYIRGSGDGNIIGREMRFHLWFDPTEDFHNYAILWKPSEIIFLVDDVPIRKYPRKSDATYPTRTMYVYGSIWDASSWATEEGKYKADYKYQPFVGRYKNFKLKGCTTNSPASCQPPSASPSGHASLTPQQYAAMQWVQNNYLVYDYCHDTKRDHTLTPEC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0344 292 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 292 IPR013320 -
Acco08g0344 292 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 256 292 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Acco08g0344 292 Gene3D - 18 292 - -
Acco08g0344 292 FunFam Xyloglucan endotransglucosylase/hydrolase 26 292 - -
Acco08g0344 292 Pfam Glycosyl hydrolases family 16 40 221 IPR000757 GO:0004553|GO:0005975
Acco08g0344 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 36 292 IPR044791 GO:0004553
Acco08g0344 292 PIRSF EndGlu_transf 18 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Acco08g0344 292 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 229 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0344 Acco-ChrAcco08 2684212 2685616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0344 9 292 Glycoside Hydrolase AT3G44990 67.606 2.79e-142 400
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3738 01 53476045 53476724 Acco08g0344 08 2684212 2685616 CCT