Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0268 ATGCCATTAATATCGAATTGCCCACCTTCAGCCTTCCTTACCATCTCCGGTCACCGGCATCATGCTCTGACGCCACCATTAATCTCGTCCAATCATGCGGCGGCTCTGTGTCTGAGATCCGAACTTTTTTCTTCCTACACGTTTATTTTGTCTCGACACCTGGAATTTGGTCGAGGGAAATTCCTGGGAGTTCTCGCTAATTGGCTGGAAGATGAAGAGAAAGTGAAAAAGTTTTTGAAAATGAATTCAAGGGAAGGAGTGAATGATGGTCGAACTAGAATTGAACCAAATGACTCTCTTCTCCCTGGTCTTATTGATGATGTTGCCCTGAACTGTCTTGCGTGGGTTAGTAGATCGGATTATGCTTCACTATCTTGTATAAATAAAAGATACAATAAGCTGATTAAAAGTGGGTATTTATATGGGTTGAGGAAACAGTTGGGACTTGTGGAGCATTGGGTTTATTTGGTGTGTGATCCCCGGGGATGGGAGGCCTTTGACACCATGAAAAAGAAATGGATGGCTCTACCCAAGATACCATGTGATGAATGCTTCAACCATGCGGACAAGGAGTCCTTGGCTGTGGGCAGTGAACTATTGGTATTTGGTCGGGAATTGTTGGATTTTGCCATCTGGAAGTATAGCTTGGTTTTTCATGGTTGGGTTAAGTGCCAGGGGATGAATAGGCCACGCTGTTTGTTTGGATCTGGTAGTCTCGGCTCGATTGCCATTGTTGCTGGTGGAAGTGATAGAAATGGACATGTTCTAAAATCAGCTGAGCTGTATGACTCTTCGTCTGGTAAATGGGAACAGTTACCAAACATGCACACACCACGTAGATTGTGCTCTGGTTTTTTCTTGGATGGAAAATTCTATGTGATTGGTGGAATGTCCAGTCCTACAGTTTCTTTGACCTGTGGAGAGGAGTATAATCTTGAGACAAGAAGTTGGCGGAAAATAGAGGATATGTATCCATTTGTTAATGGGGCTGCTCAGGCACCCCCACTTGTGGCAGTTGTGGACAACCAGTTATTTGCTGTGGAGCATCTGACCAACATGGTGAAGAAGTACAACAAGGTAAAGAATGCCTGGGATGAATTGGGAAGGCTTCCAGTCCGGGCTGATTCTTCTAATGGATGGGGGTTGGCTTTCAAGGCTTGTGGGAAGCACCTTCTGGTCGTGGGTGGTCAGAGAGGTCCTGAAGGTGAAGCTGTTGTGCTGAATTCCTGGTGCCCTGCATCAGGGGTTAAAAACGGCACCTTAGATTGGCAGGTTCTTGCTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTATTATGGGTTGTTGA 1335 0.4547 MPLISNCPPSAFLTISGHRHHALTPPLISSNHAAALCLRSELFSSYTFILSRHLEFGRGKFLGVLANWLEDEEKVKKFLKMNSREGVNDGRTRIEPNDSLLPGLIDDVALNCLAWVSRSDYASLSCINKRYNKLIKSGYLYGLRKQLGLVEHWVYLVCDPRGWEAFDTMKKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELLDFAIWKYSLVFHGWVKCQGMNRPRCLFGSGSLGSIAIVAGGSDRNGHVLKSAELYDSSSGKWEQLPNMHTPRRLCSGFFLDGKFYVIGGMSSPTVSLTCGEEYNLETRSWRKIEDMYPFVNGAAQAPPLVAVVDNQLFAVEHLTNMVKKYNKVKNAWDELGRLPVRADSSNGWGLAFKACGKHLLVVGGQRGPEGEAVVLNSWCPASGVKNGTLDWQVLAVKEHVGVFVYNCAIMGC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0268 444 Gene3D - 151 432 IPR015915 GO:0005515
Acco08g0268 444 Pfam Kelch motif 230 275 IPR006652 GO:0005515
Acco08g0268 444 Pfam Kelch motif 278 323 IPR006652 GO:0005515
Acco08g0268 444 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 95 444 - -
Acco08g0268 444 SUPERFAMILY Kelch motif 161 401 IPR015915 GO:0005515
Acco08g0268 444 CDD F-box_AtAFR-like 100 144 - -
Acco08g0268 444 SMART kelc_smart 290 342 IPR006652 GO:0005515
Acco08g0268 444 SMART kelc_smart 242 289 IPR006652 GO:0005515
Acco08g0268 444 FunFam F-box/kelch-repeat protein SKIP11 146 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0268 Acco-ChrAcco08 2003783 2007930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0268 95 321 Miscellaneous Gene Families AT4G33900 25.551 1.01e-11 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0268 08 2003783 2007930 Acco08g0268 08 2003783 2007930 ECH