Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0213 ATGTCGGGTCTACTTAATTCTTCTTTGAATGGATCTGCTTCAAATCTTGCAGACAGTGCTGGGAGGTCATTTGCCACATCATTCTCCGGCCAGTCTGGTGCTGCCTCCCCGGTTTTCCATCATAGTGGTGCTATCCAGGGATTGCACAACATGCATGGCTTTAATGTTCCCAACATGCCAGGCACACTTGCATCAAGAAATTCAACGATAAATAGCATCCCATCTGGAGGTGTTCAACAGCCTACTGGAAGCCTTTCTAGTGGAAGATATGCATCAAATAATCTTCCTGTTGCTTTGTCCCAGCTAACTCTTGGAAGCTCTCATGGACATTCAGGAGTAACAAACAGAGGAGGTATAAGTGCTGTAGGAAATCCTGGATTTAGTAGTAGCACAAATGGAGTTGGCGGTTCTATTCCTGGGATTCTTCATACATCTGCTGCAATTGGTAACAGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTTCTCGAATTACAAGTTCTATGGGGAACATGGTTGGTGGAGGCAACATTGGGAGGAGCATTAGCTCTGCTGGAGGATTGTCTGTGTCTGGTCTTGCTTCTCGTCTAAATTTAAGTGCGAACAGTGGATCTGGTGGTTTAAGTGTGCAAGGACAGAATCGGTTGCTGAGTGGCATGCTTCCACAAGGATCACCCCAAGTTATTTCAGTGCTAGGAAATTCTTATCCCAGTGCTGGAGGTCCCCTTGCCCAAAGCCATGTTCAAGCAGTAAATAATTTGAACTCAATGGGGATGTTGAATGATATGAATTCAAATGACAGCTCACCTTTTGACATCAATGACTTTCCTCAATTGACTAGTCGACCCAATTCTGCTGGAGGGCCCCAAGGACAGTTGGGTTCTCTGCGAAAGCAGGGTCTTGGAGTTAGTCCCATTGTCCAGCAAAACCAAGAATTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTTAAAGGTGGCAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGAGAATGCTGTGTCCATGATGCAATCTCAACATTTTCCTATGGGAAGGTCTTCTGGTTTCAGCTTAGGGGGGACATATTCTTCACATCGATCCCAGCAACAACAGCATGCTCCATCTGTCAGTAGTGTTGGTTCCTCTTTTTCATCTGCAAACAATCAGGAACTTCTCCATGTACATGGGTCAGATGTATTTCCAGCATCGCATTCAACCTATAATTCCCAGGCCAGTGGACCTTCTGGCATTGGATTAAGGCCTCTAAATTCTTCAAATACTGTTTCTGGCATGGGATCATATGACCAGCTTATCCAGCAATACCAACAGCACCAAAATCAGCCCCAGTCGCATTTTCGTCTTCAACAAATGTCTACTGCAAATCAGTCTTTTAGAGATCAAGGCATGAAATCCATGCAAACTTCCCAATCAACACCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGATTTGACATCTCTTGCACTTGGAATTGATCTTACAACACTAGGGTTAAATTTAAATTCATCAGAAAATCTCCACAAGACTTTTGGATCTCCATGGTCTGATGAACCGGCAAAGGGCGATCGAGATTTCACAGCGCCACAATGTTATTATGCTAAACCGCCACCGGCTCTGCATCAAGGCTATTTTTCAAAGTTTACGGTGGAAACGTTGTTTTACGTATTTTACAGTATGCCCAAAGATGAAGCTCAATTATATGCCGCAAATGAGCTTTACAATAGAGGCTGGTTTTATCACAAAGAACATCATTTGTGGTTTATTAGAGTTTCTAACGTGGAGCTACTTGTTAAAACAAACACGTATGAGAGGGGATCTTATATCTGCTTCGATCCAAACACATTTGAAATGATTCGTAAGGATAATTTTGTCGTTCAGTATGAGTCGTTGGAAAAACCTACCCCTGCCCCAGTATTGAGGGGGTAA 2007 0.4325 MSGLLNSSLNGSASNLADSAGRSFATSFSGQSGAASPVFHHSGAIQGLHNMHGFNVPNMPGTLASRNSTINSIPSGGVQQPTGSLSSGRYASNNLPVALSQLTLGSSHGHSGVTNRGGISAVGNPGFSSSTNGVGGSIPGILHTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVGGGNIGRSISSAGGLSVSGLASRLNLSANSGSGGLSVQGQNRLLSGMLPQGSPQVISVLGNSYPSAGGPLAQSHVQAVNNLNSMGMLNDMNSNDSSPFDINDFPQLTSRPNSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHENAVSMMQSQHFPMGRSSGFSLGGTYSSHRSQQQQHAPSVSSVGSSFSSANNQELLHVHGSDVFPASHSTYNSQASGPSGIGLRPLNSSNTVSGMGSYDQLIQQYQQHQNQPQSHFRLQQMSTANQSFRDQGMKSMQTSQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDRDFTAPQCYYAKPPPALHQGYFSKFTVETLFYVFYSMPKDEAQLYAANELYNRGWFYHKEHHLWFIRVSNVELLVKTNTYERGSYICFDPNTFEMIRKDNFVVQYESLEKPTPAPVLRG 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0213 668 Pfam NOT2 / NOT3 / NOT5 family 535 657 IPR007282 GO:0006355
Acco08g0213 668 FunFam probable NOT transcription complex subunit VIP2 isoform X1 485 666 - -
Acco08g0213 668 MobiDBLite consensus disorder prediction 65 89 - -
Acco08g0213 668 MobiDBLite consensus disorder prediction 369 396 - -
Acco08g0213 668 PANTHER CCR4 NOT-RELATED 55 659 IPR040168 GO:0030015
Acco08g0213 668 Gene3D - 485 666 IPR038635 -
Acco08g0213 668 MobiDBLite consensus disorder prediction 267 302 - -
Acco08g0213 668 MobiDBLite consensus disorder prediction 267 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0213 Acco-ChrAcco08 1486192 1490727 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0213 08 1486192 1490727 Acco08g0213 08 1486192 1490727 ECH