LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco08g0211	ATGGATGATGAACTTCTTGAGCTGCAAAGACAATTCGAGTTCGCTCAGCAGGCAAAGTCGAATGTTCGATTATCGGAGAGAAACGTTGTTGAATTGGTTCAGAAATTGCAGGAGCTTCACATCATTGATTTCGACCTTCTTCACACTGTCTCTGGCAAAGAGTACATCACTCCCGAGCAACTGAGGAATGAGATGGTGGCTGAAATTAAGAAGCTAGGGCGTGTTTCTCTGATTGATCTCGCTGATGCTACTGGAGTCGATTTATACCATGTTGAGAAGCAGGCTCAACAAGTTATAAAAGATCATCCAGAGATGATGCTGATTCAAGGGGAAATCATGTCAGAATCTTATTGGGATTCCATAGCTGAAGAAATTAACGAGAGGCTTCAGGAATGTAGTCAGATTGCACTTACAGAACTTGCCGCACAATTAAATGTTGGTCTAGAATTGGTTGCCTCCATGTTGGAGCCCCGTCTTGGAACTATGGTGAAGGGCAGGCTTGAAGGTGGGCAGTTGTATACTCCAGCATATGTAGCTCGTGTTGGTGCCATGGTTCGAGGTGCTGCCAGGGGCATCACTGTTCCGACAAATTTGTCATTGTTATGGAGCTTGTTACAACAATTACTGCAAGAAATGGATGGAACCAGCAGTGTCGTTACTGAAGGAGCTTTCTTCCAGTCACTTTTTAATGGGCTTGTGAAGGAAAGTGAGATTCTAGGATCACTTCGTGCTGGAATACATTGGACACCCGCGGTCTTTGCCATTGCTCAAAAGGAATCGGTGGATTCATTCTTCTCACAGAATTCTTTTATTGGCTATGACGTTCTACAGAAACTTGGAATTCCCCAGCCCGTTCAATTCTTGCAGTCCAGATATCCTGAAGGTATACCTCTAGATACAATGTTTGTCCACCCATCAATGATTGAAATGCTGGATGCTGCTACTGAGGATGCCCTTGAGTGTGGTAGTTGGAGTGATGCTCTTTCCTTATTGCCTTCGTCCTTCACTCCTCAAGATGCATCTAAAATGTTGACCTTCTGCCAATCTGTTCAGTCTGCTCTTAAGACTAACCAAGCACACATTTTTGGGGATTTTTATGTTTTGAGCAACAGCTTTATGAAGGGCATCTGTGAGCACTTGGTGAAAGAAATGGAAACACTAGGTGTTCCAGGGTCTTCTGGCATTAAAATGTTTAGTGATTCACAAGTAGTGAATGAAGGAAAAATTGGGCAGGACTTAATTCGATTGAATGAGTCAAATGAAAATGCAACTGATGGTAGTGCCATTAAACATGCCGATAGAGGATCAAAGAAGAAAAAGGGAAAGGCTGCTGGGAATGCGGCAGCAAATGTGTCTGACAGTGCTGCAGATATTCCGGAACAGACTTCCTCAAAATCTAAGAGAAACCAGAGAAGGGGCAAGGAAACCTCTTCCTCACAAATGTCAGATTCAAAAATTGGTTCTAGGAAAGAATCACTTAAAACAAAGGAGGATAGCCTCAGTTGTCCTTCAGATGAGTGGATTATGCAGAAGATTATGACTTTGGTTCCTGATTTCGAAGAACAATGCATGGATGATCCTGACACAATTCTGAGGCCTTTGGCTAATCATCTAAGGCCTACAATAATGGCTTCTTGGATGGAGAAGAAGAAAGCGCTGTTTACAGACAATGCTGAAAGAATGAAATCTTTGCTTGATAATTTGCAAAAGAAACTTGATGAATCTTTCTTAAACATGCAGCTTTATGAAAAAGCTTTAGAATTGTTTGAAGATGACCAGTCAACCTCCGTTGTTATGCATAGGCATTTATTGAGAACAGTAGCTGCCCCTATGGTGGATATGCTTCTTCGTACATTGGATGAGCACAACAAGTTAAAGAACGGGTTTGAAGTGGAGGAAGCTTCTAATTCTGAACTGCTTACACTTAGTCCTGGAGACAGAGCTGCTATCTCAAAGAGTTTACCGGTAGCGCTTGGTAAAAAAGCTCTTGTTGTTGTTGAAGCATTGGAAGGAAAGCGAGTGGAAACGTTTATGGATGCTTTTAGAGAGGTAGCAGAAGAGAGTGGGTTGTCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTTTACACTCATATCGTAAGGAATTGACATCTCAAATTTCTAATGAGACTGATCCAATATCACTTCTGGCAAAAGTTGTGTCTTTACTTTACGTGCAGGTTTACCACAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTGTCGCCATCTCCCAACTGAAGGACAAGTTGGATGAGTCGTCATTCAAGATTTTGACCGATTATCAGAGCGCTACAGTGACTCTTCTGGCATTATTAGCGGCTGCAACTGGCGATGAAGAGGATTGTTCAGCTGATAGAGTATTGAGCAAACGGGAGCTTTTGGAGAGCCGAATGCCATCTTTGAAAAGCCTAGTCTTGAGCTCCTCGCAATCGTCATAG	2466	0.4258	MDDELLELQRQFEFAQQAKSNVRLSERNVVELVQKLQELHIIDFDLLHTVSGKEYITPEQLRNEMVAEIKKLGRVSLIDLADATGVDLYHVEKQAQQVIKDHPEMMLIQGEIMSESYWDSIAEEINERLQECSQIALTELAAQLNVGLELVASMLEPRLGTMVKGRLEGGQLYTPAYVARVGAMVRGAARGITVPTNLSLLWSLLQQLLQEMDGTSSVVTEGAFFQSLFNGLVKESEILGSLRAGIHWTPAVFAIAQKESVDSFFSQNSFIGYDVLQKLGIPQPVQFLQSRYPEGIPLDTMFVHPSMIEMLDAATEDALECGSWSDALSLLPSSFTPQDASKMLTFCQSVQSALKTNQAHIFGDFYVLSNSFMKGICEHLVKEMETLGVPGSSGIKMFSDSQVVNEGKIGQDLIRLNESNENATDGSAIKHADRGSKKKKGKAAGNAAANVSDSAADIPEQTSSKSKRNQRRGKETSSSQMSDSKIGSRKESLKTKEDSLSCPSDEWIMQKIMTLVPDFEEQCMDDPDTILRPLANHLRPTIMASWMEKKKALFTDNAERMKSLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVMHRHLLRTVAAPMVDMLLRTLDEHNKLKNGFEVEEASNSELLTLSPGDRAAISKSLPVALGKKALVVVEALEGKRVETFMDAFREVAEESGLSLKKLDKKLERTLLHSYRKELTSQISNETDPISLLAKVVSLLYVQVYHKALQAPGRAISVAISQLKDKLDESSFKILTDYQSATVTLLALLAAATGDEEDCSADRVLSKRELLESRMPSLKSLVLSSSQSS	821

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco08g0211	821	PANTHER	E3 UFM1-PROTEIN LIGASE 1	2	820	IPR018611	GO:0061666\|GO:0071569
	Acco08g0211	821	Coils	Coil	15	35	-	-
	Acco08g0211	821	MobiDBLite	consensus disorder prediction	417	500	-	-
	Acco08g0211	821	Pfam	E3 UFM1-protein ligase 1	4	288	IPR018611	GO:0061666\|GO:0071569
	Acco08g0211	821	Coils	Coil	551	585	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco08g0211	1	787	EF-hand Containing Proteins	AT3G46220	63.914	0.0	981

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Acco08g0211	08	1478409	1485070	Acco08g0211	08	1478409	1485070	ECH