Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0111 ATGGAACCAGCTTCCCTACAGTCGGTTTGGAGAGGTGTGCCGCCTCCAAACCCTGTCTCCTTCGCTGCAGCTGACTCTGTAACCTCCAAATTTTGGCTGCCATCAGCCCATCACAAGCGTCTTGCAAAGATCTCAGTTTGCAGAGCCTTGCGCATAGTAACAGGCTGCTGCGTAAAGATGGTGCAATATAACTTCAAGAAAATAACTGTGGTACCCAACGGGAAGGACTTCATTGACATAATCCTTTCTCGCACTCAGCGTCAAACGCCAACAGTTGTGCATAAAGGATATAAGATATCCCGCCTCCGTCAATTCTACATGCGCAAAGTGAAGTATACACAACAAAATTTTCATGAAAAACTCTCCACTATCATTGATGAATTCCCTCGGCTTGATGGTATTCATCCATTCTATGGCGATCTCCTTCATGTTCTCTACAACAAGGACCATTACAAGCTTGCACTTGGACAAGTCAATACTGCTAGAAACCTTATTGGGAAGATTTGTAGGGACTATGTGAAATTATTGAAGTATGGTGATTCACTATACAGATGCAAATGTCTGAAGGTTGCTGCTCTTGGCCGAATGTGCACTGTGATTAAGAGGATTGGCCCAAGTTTGGCTTATCTAGAGCAGGTTAGACAGCACATGGCAAGGCTCCCATCAATAGATCCGAACACGAGGACTGTCTTGATCTGTGGTTACCCTAATGTTGGCAAGAGCTCATTCATTAACAAAATTACCAGAGCTGATGTGGATGTGCAGCCCTATGCTTTCACTACTAAGTCACTCTTTGTCGGTCATACAGACTACAAATACCTAAGGTACCAAGTAATTGATACACCAGGTATTCTGGACCGGCCTTTTGAAGATCGAAACATTATTGAGATGTGCAGCATTACTGCCCTTGCTCATTTGCGAGCTGCTATATTGTTTTTCTTAGACATATCTGGATCTTGTGGTTATAGTATCACACAGCAGGCAGCTCTATTTCACAGCATTAAGTCTCTGTTTATGAACAAGCCATTAATAGTAGTCTGCAATAAAACTGATTTGCAACCCCTGGAAGGGGTATCTGAGGAAGACAAGAAGTTGATCATGGAGATGAAAGCTGAGGCCTTGAAGACTTTGGTTGGTCAAGGAGGTGAGCCTGCAAATGATGAAAGTGTGTTGTTGACCATGAGCACTTTGACAGAAGACGGGGTAATTGCTGTAAAAAGTGCAGCATGTGAAAGATTGCTAAATCAAAGGGTGGAGATAAAGATGAAGTCGAAAAAGATAAATGACTGCTTGAATAGATTTCATGTTGCAGTGCCAAAACAACGTGACCAGAAGGAAAGGCAACCTTTTATTCCCCAAGCGGTCTTAGAAGCTAAGGCCAAGCAAGCAGCAGAAAAGGAAAAGAGAAAAACTGAAAAGGATCTGGAAGATGAGAATGGTGGTGCAGGTGTATACTCAGCAAACTTGCGGAAGAACTATATTTTGGCTAATGATGAATGGAAAGAAGATGTGCTGCCAGAAATTTTGGATGGGCACAATGTATATGATTTCATTGATCCTGATATCCTGCATAGGCTCGAAGAACTGGAAAGGGAAGATGGGCTAAGACAGGCTGAGGAGTTAGATGACGATTTTGAGATGGACGGAAATGAGTTGAGTCCGGAAGAACAGGAAGCTTTAGCTGCAATAAGAAAAAAGAAAAGCTTGCTCATCCAAGAGCATAGGAAGAAAAAGAGTACTGCAGAGAGTAGGCCTATTGTTCCAAGAAAATATGACAAGGACAGGAAGTTTACCACAGAAAGAATGGGAAGGCAGCTTTCAACTTTGGGGCTTGATCCCTCTTTGGCAATTGACAGGGCACGCAGCAGATCTGTTTCTAGGAGAGGTAGGAAGAGGGAAAGATCTCCTGAAAACAGAGGTGCTGATGTGATGGATATAGATGGTGACTCATCCAGCAAGAAGCAGCGTACTAGATCTAGGTCAAGGTCCAGGTCAGTTTCACGCCCACCAACTGAATTTGTGCCTGGTGAGGGCTTGAAGGATTCTGCTCAAAAGGTTAAGGCAGTAAAACTTGCTAAGAAATCTGTCAAGAAGAGGAACAAGGATGCTCGTCACGGTGAAAGAGATTCGATGGTTGATTTAGGCTTTGTGGAGACAATATCCCGATTCTGGGGATGGCTTGTGACTGGTGCCAAGTTTGTTTTTGAATTGAGTTGCTGA 2220 0.4351 MEPASLQSVWRGVPPPNPVSFAAADSVTSKFWLPSAHHKRLAKISVCRALRIVTGCCVKMVQYNFKKITVVPNGKDFIDIILSRTQRQTPTVVHKGYKISRLRQFYMRKVKYTQQNFHEKLSTIIDEFPRLDGIHPFYGDLLHVLYNKDHYKLALGQVNTARNLIGKICRDYVKLLKYGDSLYRCKCLKVAALGRMCTVIKRIGPSLAYLEQVRQHMARLPSIDPNTRTVLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYSITQQAALFHSIKSLFMNKPLIVVCNKTDLQPLEGVSEEDKKLIMEMKAEALKTLVGQGGEPANDESVLLTMSTLTEDGVIAVKSAACERLLNQRVEIKMKSKKINDCLNRFHVAVPKQRDQKERQPFIPQAVLEAKAKQAAEKEKRKTEKDLEDENGGAGVYSANLRKNYILANDEWKEDVLPEILDGHNVYDFIDPDILHRLEELEREDGLRQAEELDDDFEMDGNELSPEEQEALAAIRKKKSLLIQEHRKKKSTAESRPIVPRKYDKDRKFTTERMGRQLSTLGLDPSLAIDRARSRSVSRRGRKRERSPENRGADVMDIDGDSSSKKQRTRSRSRSRSVSRPPTEFVPGEGLKDSAQKVKAVKLAKKSVKKRNKDARHGERDSMVDLGFVETISRFWGWLVTGAKFVFELSC 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0111 739 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 371 IPR027417 -
Acco08g0111 739 Pfam NOGCT (NUC087) domain 469 522 IPR012973 -
Acco08g0111 739 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 228 414 IPR031167 GO:0005525
Acco08g0111 739 PRINTS GTP1/OBG GTP-binding protein family signature 251 269 IPR006073 GO:0005525
Acco08g0111 739 PRINTS GTP1/OBG GTP-binding protein family signature 278 293 IPR006073 GO:0005525
Acco08g0111 739 PRINTS GTP1/OBG GTP-binding protein family signature 230 250 IPR006073 GO:0005525
Acco08g0111 739 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 62 568 - -
Acco08g0111 739 MobiDBLite consensus disorder prediction 571 706 - -
Acco08g0111 739 Coils Coil 461 481 - -
Acco08g0111 739 MobiDBLite consensus disorder prediction 630 656 - -
Acco08g0111 739 Pfam NOG1 N-terminal helical domain 65 224 IPR041623 -
Acco08g0111 739 Gene3D - 221 432 IPR027417 -
Acco08g0111 739 FunFam Nucleolar GTP-binding protein 1 62 220 - -
Acco08g0111 739 FunFam Nucleolar GTP-binding protein 1 221 433 - -
Acco08g0111 739 Gene3D - 61 220 - -
Acco08g0111 739 MobiDBLite consensus disorder prediction 574 601 - -
Acco08g0111 739 CDD NOG 228 414 - -
Acco08g0111 739 Pfam Nucleolar GTP-binding protein 1 (NOG1) 295 351 IPR010674 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0111 Acco-ChrAcco08 773266 778358 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0111 08 773266 778358 Acco08g0111 08 773266 778358 ECH