Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0095 ATGTCTTCTTCAACCGCCTCTGCCACCACTGGCTCCTCCCCTGACCACCTTCAAACGCCCACATTAGACCGCGAATCTTCCGCTCTCCTCCACTCCATTTCCGAGCATGGAGGCTATGCTTACGTCAGCATGGCCGCCCTCAGCGACTTCCGAGCTGCCCGTGAGATGGCCTGGGAGCAGCTTCATTCGGGCCCTCCGCACTCTGTCTTCCCAGTTTGGCGCGACGCTTACTCTATGGCGTGCCTTCACGTTGCCAAGCACCATTACACCAACGGTGAGTTCAAGGAGGCTCTCAGGGCTTTGGATATGGGACTGATCATGGGGGGATCGCTTCTAAAGAAAGACTTGAGCTCTGCTGCTGACAAAGTATCGGAGAGGCTCAGGAACATTATGGCTTCCAATGAAAGCCACGAAGGCTTTGGGATGTCCGAGCATCGACTTGTCAGTCACCAACTTAACCAGGCAGAGGTGCACAAACTTCTACCCTTCAACTCCTTTTCTCATAAAATCGTGGAGAAAAGGTCTGCTCTGTCATTGGAAAGGTTCCTAGAAGATTATTACCGGGCTGGCTCCCCGGTTGTCATCAGTGACTGTATAGCTCACTGGCCAGCCAAGACAAAATGGAATGACATAGATTATTTGAAGAAAGTTGCTGGTGATCGCACGATTCCAGTAGAGGTTGGGAAGGGCTATTTATGTGCAGAGGGGAAGCAAGAGTTAATTACATTTTCAGAGTTTCTTCAGCGTATAGAGTCCCATGCCTGCTCTTCTGCCGGTCCTACATATCTTGCTCACCATCCACTATTTGATCAGATAAATGGGCTCCGGAAAGATATTCGTATTCCTGACTACTGTTTTGTTGGTGGAGGGGAGCTAAGATCTCTCGATGCTTGGCTTGGTCCTGCGGGGATGGTAATACCATTACACCATGATCCACACCATAATATACTAGCTCAGGTTGTTGGGAAGAAATATGTAAGGCTCTACCCCCCGTCTGTGTCTAAGGAACCTTACCCTTGCACTGAAACAATCCTTATGAATTCCAGTCAGATTGATCTAGATAACATAGATGAAATGATGCTTCCTGGGGTGGAAGACTTGGAATTCGTAGACTGTATATTAGAGGAGGGTGAATTGCTATATATCCCGCAAAAATGGTGGCACTATGTCCGCTCTCTGACTACAAGTTTCTCCGTTAGTTTCTTGTGGAGTAAGGCCGAAGTTTCAGCTACATCCTGA 1239 0.4867 MSSSTASATTGSSPDHLQTPTLDRESSALLHSISEHGGYAYVSMAALSDFRAAREMAWEQLHSGPPHSVFPVWRDAYSMACLHVAKHHYTNGEFKEALRALDMGLIMGGSLLKKDLSSAADKVSERLRNIMASNESHEGFGMSEHRLVSHQLNQAEVHKLLPFNSFSHKIVEKRSALSLERFLEDYYRAGSPVVISDCIAHWPAKTKWNDIDYLKKVAGDRTIPVEVGKGYLCAEGKQELITFSEFLQRIESHACSSAGPTYLAHHPLFDQINGLRKDIRIPDYCFVGGGELRSLDAWLGPAGMVIPLHHDPHHNILAQVVGKKYVRLYPPSVSKEPYPCTETILMNSSQIDLDNIDEMMLPGVEDLEFVDCILEEGELLYIPQKWWHYVRSLTTSFSVSFLWSKAEVSATS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0095 412 ProSiteProfiles JmjC domain profile. 255 412 IPR003347 -
Acco08g0095 412 MobiDBLite consensus disorder prediction 1 20 - -
Acco08g0095 412 Pfam Cupin-like domain 181 403 IPR041667 -
Acco08g0095 412 SMART cupin_9 261 410 IPR003347 -
Acco08g0095 412 SUPERFAMILY Clavaminate synthase-like 172 404 - -
Acco08g0095 412 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 75 406 - -
Acco08g0095 412 FunFam lysine-specific demethylase JMJ30 170 403 - -
Acco08g0095 412 Gene3D Cupin 169 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0095 Acco-ChrAcco08 664293 667893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0095 165 390 Acyl Lipid Metabolism Gene Families AT3G45880 26.087 2.32e-12 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0095 08 664293 667893 Acco08g0095 08 664293 667893 ECH